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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ig0B_

Fold library idPDB HeaderMoleculeTitle
c6ig0B_3.37PDB header: rna binding proteinChain: B: PDB Molecule: type iii-a crispr-associated ramp protein csm4;


Added to library: Sat Dec 22 10:08:45 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TYKLYIMTFQNAHFGSGTLDSSKLTFSADRIFSALVLEALKMGKLDAFLAEANQDKFTLTDAFPFQFGPF
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Known secondary structure (DSSP)



SSB


SSSSS


S


TTTT
TTSSS







BSSSB
 .........80.........90.........100.........110.........120.........130.........140
Sequence LPKPIGYPKHDQSVDVKEVRRQAKLSKKLQFLALENVDDYLNGELFENEEHAVIDTVTKNQPHKDDNLYQ
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SS
S




S
TTS

TTS













TT
SS



 .........150.........160.........170.........180.........190.........200.........210
Sequence VATTRFSNDTSLYVIANESDLLNELMSSLQYSGLGGKRSSGFGRFELDIQNIPLELSDRLTKNHSDKVMS
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Known secondary structure (DSSP)

SS
B





TTTTTT
SSSSTTTT
S





TTTTTS

SS

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence LTTALPVDADLEEAMEDGHYLLTKSSGFAFSHATNENYRKQDLYKFASGSTFSKTFEGQIVDVRPLDFPH
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Known secondary structure (DSSP) SS




TTT
B




B





SS
SS





B



TT
S








SS
SS
 .........290.....
Sequence AVLNYAKPLFFKLEV
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Known secondary structure (DSSP)






S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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