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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6bwiA_

Fold library idPDB HeaderMoleculeTitle
c6bwiA_3.70PDB header: membrane proteinChain: A: PDB Molecule: transient receptor potential cation channel subfamily m


Added to library: Sat Dec 22 09:46:02 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP)

STTGGG

TTS

SS





SSTT


 .........80.........90.........100.........110.........120.........130.........140
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) SS
SSTT

SS




SSS

S
TT


SSSSSTTTTTT
S


S











SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDELRLAVAWNRVDIA
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Known secondary structure (DSSP) GGGS


TTTTT












TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence QSELFRGDIQWRSFHLEASLMDALLNDRPEFVRLLISHLGHFLTPMRLAQLYSAAPSNSLIRNLLDQASG
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Known secondary structure (DSSP) TS
S
S

TTTT

SGGGSS
TT







TTTTT

S
TTTT


 .........290.........300.........310.........320.........330.........340.........350
Sequence FGESMYLLSDKATSWSDLLLWALLLNRAQMAMYFWEMGSNAVSSALGACLLLRVMARLEPDAEEAARRKD
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Known secondary structure (DSSP)
TTTTTT


TTT
SSS
TTTTTT
SSSTTSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence LAFKFEGMGVDLFGECYRSSEVRAARLLLRRCPLWGDATCLQLAMQADARAFFAQDGVQSLLTQKWWGDM
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Known secondary structure (DSSP)
SS
BTTTTB
TTT


TSTTTSSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence ASTTPIWALVLAFFCPPLIYTRLITFRCLRRWFHFWGAPVTIFMGNVVSYLLFLLLFSRVLLVDFQPAPP
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Known secondary structure (DSSP)
S


GGGSTTSSSS



GGGTTSTTT


SSS
 .........500.........510.........520.........530.........540.........550.........560
Sequence GSLELLLYFWAFTLLCEELRQGLASLSQRLRLYLADSWNQCDLVALTCFLLGVGCRLTPGLYHLGRTVLC
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Known secondary structure (DSSP)
SSTT


SSTTSTTTTSSS

SS
 .........570.........580.........590.........600.........610.........620.........630
Sequence IDFMVFTVRLLHIFTVNKQLGPKIVIVSKMMKDVFFFLFFLGVWLVAYGVATEGLLRPRDSDFPSILRRV
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Known secondary structure (DSSP) TT

SSSSTS

SS

T
 .........640.........650.........660.........670.........680.........690.........700
Sequence FYRPYLQIFGQIPQEDMDVALMEHSNCSSEPGFWAHPPGAQAGTCVSQYANWLVVLLLVIFLLVANILLV
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Known secondary structure (DSSP) TTTTTTTSSS



SSS
TTTS

S


SSSS


SSSSS
SS
S
STTTTS
 .........710.........720.........730.........740.........750.........760.........770
Sequence NLLIAMFSYTFGKVQGNSDLYWKAQRYRLIREFHSRPALAPPFIVISHLRLLLRQLKEAERKLLTWESVH
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Known secondary structure (DSSP) TTTSS
SS
SSS

TT

 .........780.........790.........800.........810......
Sequence KENFLLARARDKRESDSERLKRTSQKVDLALKQLGHIREYEQRLKV
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Known secondary structure (DSSP) TTSTT
TTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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