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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ak1B_

Fold library idPDB HeaderMoleculeTitle
c6ak1B_2.28PDB header: oxidoreductaseChain: B: PDB Molecule: dimethyl-sulfide monooxygenase;


Added to library: Sat Dec 22 08:47:07 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KRIVLNAFDMTCVSHQSAGTWRHPSSQAARYNDLEYWTNMAMELERGCFDCLFIADVVGVYDVYRGSAEM
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Known secondary structure (DSSP)


SBSBSSSSSGGGSTT

GGGTT
TT
S

SS



GGGSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ALRDADQVPVNDPFGAISAMAAVTEHVGFGVTAAITFEQPYLLARRLSTLDHLTKGRVAWNVVSSYLNSA
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Known secondary structure (DSSP) TBS
SB

TTTTT
SS
SSSS
TTS




 .........150.........160.........170.........180.........190.........200.........210
Sequence ALNIGMDQQLAHDERYEMADEYMEVMYKLWEGSWEDDAVKRDKKSGVFTDGSKVHPINHQGKYYKVPGFH
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Known secondary structure (DSSP)


SSS
GGGTSB
TTSTTTT
GGGB




SS

S

 .........220.........230.........240.........250.........260.........270.........280
Sequence ICEPSPQRTPVIFQAGASGRGSKFAASNAEGMFILTTSVEQARQITTDIRNQAEAAGRSRDSIKIFMLLT
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Known secondary structure (DSSP) SS


SSSS



T
S


STT

TTSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence VITGDSDEAAEAKYQEYLSYANPEGMLALYGGWTGIDFAKLDPDEPLQAMENDSLRTTLESLTHKKWTVR
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Known secondary structure (DSSP)
SSTT




GGGS
TTSBGGG
S



SB
 .........360.........370.........380.........390.........400.........410.........420
Sequence DVIRERCIGGLGPVLVGGPQKVADELERWVDEGGVDGFNLAYAVTPGSVTDFIDYIVPELRKRGRAQDSY
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Known secondary structure (DSSP) TTTTTTS

TT



SSTTTTT
S
SS
 .........430.........440.........450.........460......
Sequence KPGSLRRKLIGTNDGRVESTHPAAQYRDAYVGKESVADRTQPSPFA
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Known secondary structure (DSSP)
SS
T

TTSS

TTSGGGGGTTTTTTS

GGGG



TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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