| 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence |
C | L | W | N | N | I | A | A | L | P | A | D | P | I | F | S | A | S | L | V | A | K | K | A | P | E | P | K | A | D | L | I | I | G | A | Y | R | D | A | E | G | H | P | Y | P | L | N | V | V | R | K | A | E | Q | R | L | L | E | L | P | M | S | G | Y | A | P | F | I | E | E |
Predicted secondary structure |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
| T | T | T | T |
|
|
|
|
|
|
| T | T |  |  |  |  |  |  |  |  |  | S |
| S | S |
|  |  |
| S | S | T | T | S | S | S | T | T |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | T |
|
|
| T | T |
|
|  |  |  |  |  |  |
  | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence |
S | L | K | I | A | Y | G | D | S | V | A | R | E | N | V | V | G | I | Q | G | L | S | G | T | G | S | L | S | I | G | A | C | F | L | A | R | V | L | S | R | D | T | P | V | Y | I | S | D | P | T | W | P | N | H | Y | A | V | M | A | A | A | N | L | T | D | L | R | K | Y | R |
Predicted secondary structure |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
 |  |  |  |  |  | G | G | G | S |
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| T | T | S |
|  |  |  |  |  | S |
|
| T |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |  |  |
  | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence |
Y | Y | D | N | A | K | R | C | I | D | F | D | G | L | L | E | D | L | N | G | A | P | E | G | S | I | V | I | L | H | A | C | A | H | N | P | T | G | M | D | P | T | H | E | Q | W | A | K | I | L | E | V | F | Q | A | R | R | L | I | P | F | F | D | S | A | Y | Q | G | Y | A |
Predicted secondary structure |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |
|
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
|  |  | T | T | T | T |  |  |
|  |  |  |  |  |  |  |  |  | T | S |
| T | T |
|  |  |  |  |  |
| S | S |
| T | T | T |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  | S |
| T | T | T | T |
  | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 |
Sequence |
T | G | S | L | D | N | D | A | Y | S | I | R | L | F | A | R | Q | G | M | E | M | L | L | A | Q | S | Y | S | K | N | M | G | L | Y | A | E | R | V | G | V | C | S | I | V | T | A | N | P | K | K | A | P | L | I | K | S | Q | L | E | T | I | V | R | S | Q | Y | S | T | P | P |
Predicted secondary structure |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
T | S |
|  |  |  |  | T |  |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |  |  |
| T | T | T | S |
|
| G | G | G | T |  |  |  |  |  |  |  |
| S | S | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
| S | S |
|
|
  | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 |
Sequence |
A | H | G | A | R | V | A | Y | L | V | L | S | D | P | E | L | R | A | G | W | E | Q | E | L | R | V | M | S | T | R | V | L | E | M | R | Q | A | L | Y | D | G | L | K | R | L | G | T | P | G | S | W | E | H | I | I | Q | Q | V | G | M | F | S | Y | L | G | L | T | K | A | Q |
Predicted secondary structure |
 |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
 |  |  |  |  |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S | S |
|
|  |  |  |  |  |
|
| S | S |  |  |  |
|
|
|
|  |  |  |
  | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . |
Sequence |
C | E | K | L | I | E | R | R | V | F | V | L | P | S | G | R | A | N | M | A | G | L | T | K | R | S | V | E | L | L | V | K | G | I | D | E | V | V | R | T | V | T |
Predicted secondary structure |
 |  |  |  |  |  |
|
|
|  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
 |  |  |  |  |  | T | T |  |  |
|
| T | T | S |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|