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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6i27A_

Fold library idPDB HeaderMoleculeTitle
c6i27A_7.80PDB header: motor proteinChain: A: PDB Molecule: midasin,midasin,midasin,midasin,midasin,midasin,midasin;


Added to library: Sat Dec 22 10:58:07 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Predicted secondary structure






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Known secondary structure (DSSP)






SSSGGG



SST

TTTTSTT
SSSSSTTSTT

SGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Predicted secondary structure
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Known secondary structure (DSSP) GGS
TT


SST

ST

SSSGGGSSS

S

 .........150.........160.........170.........180.........190.........200.........210
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSVPECFTIEKKSSYFIIEP
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP) TTTTSSS
SSSTTT

TTTS

SS









SS
TTT




SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence QDLSTKVASICGVIVPKVHTIHDKVFYPLTFVPTHKTVSSLRQLGRKIQNSTPIMLIGKAGSGKTFLINE
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP) SSTTSSSB

SSS
B


SSGGG









SSTSSSS





SSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence LSKYMGCHDSIVKIHLGEQTDAKLLIGTYTSFEWRAGVLATAVKEGRWVLIEDIDKAPTDVLSILLSLLE
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP) TTTTSS

B

TTTSSSTTT




T

TTTS
TTTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence KRELTIPSRGETVKAANGFQLISTVRNLNMIGMRIWNVIELEEPSEEDLTHILAQKFPILTNLIPKLIDS
Predicted secondary structure




























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Known secondary structure (DSSP) GGG
B

TTS

B


SS





STTTTT








TTTTTSS
TTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence YKNVKSIYMNTKFISLNKGAHTRVVSVRDLIKLCERLDILFKNNGINKPDQLIQSSVYDSIFSEAADCFA
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP) TTTTTT
SS

S




TTTTSS


SS


TTTTSSTT

S
 .........500.........510.........520.........530.........540.........550.........560
Sequence GAIGEFKALEPIIQAIGESLTQHVPTLENLDDSIKIGRAVLMNSTLFAFTNHSLRLMEQISVCIQMTEPV
Predicted secondary structure


























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Known secondary structure (DSSP)


STTTTTTGGGTS








S

SSS


SSS













SSTT
S
 .........570.........580.........590.........600.........610.........620.........630
Sequence LLVGETGTGKTTVVQQLAKMLAKKLTVINVSQQTETGDLLGGGSLVKTIRAGEWLLLDEVNLATADTLES
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP)





TT
TTTTSS



S

S
SS

TT


SS
T

SS
TT
 .........640.........650.........660.........670.........680.........690.........700
Sequence ISDLLTEPDSRSILLSAEPIKAHPDFRIFACMNPATDVGKRDLPMGIRSRFTEIYVHSPERDITDLLSII
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP) STTSS

S












SS





SS
TT
TTT








S

TTST
 .........710.........720.........730.........740.........750.........760.........770
Sequence DKYIGKYSVSDEWVGNDIAELYLEAKKLSDNNTIVDGSNQKPHFSIRTLTRTLLYVTDIIHIYGLRRSLY
Predicted secondary structure

























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Known secondary structure (DSSP) TTS


S


TTTTSTTTSSTT
SSS


TTTSGGGSSS
S

TTTTTTT
 .........780.........790.........800.........810.........820.........830.........840
Sequence DGFCMSFLTLLDQKSEAILKPVIEKFTLGRLKNVKSIMSQTPPSPGPDYQAHYIITPFVEKNMMNLVRAT
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP) TSSTTTTTTSTTTTTS
SS
SS


B

SS

B
SS









SS

T
 .........850.........860.........870.........880.........890.........900.........910
Sequence SGKRFPVLIQGPTSSGKTSMIKYLADITGHKFVRINNHEHTDLQEYLGTYVTDDTGKLSFKEGVLVEALR
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP) T
SS




SSS
TT





TT

SSTTT





TTS

S



ST
 .........920.........930.........940.........950.........960.........970.........980
Sequence KGYWIVLDELNLAPTDVLEALNRLLDDNRELFIPETQEVVHPHPDFLLFATQNPPGIYGGRKILSRAFRN
Predicted secondary structure






































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Known secondary structure (DSSP) T


TTSSSS
SSTTTTTSSTTSSS

TTTT


SS






S
TTS



TTTST
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence RFLELHFDDIPQDELEIILRERCQIAPSYAKKIVERLFEQKNSFATLRDLFRWAVGYEQLAASGYMLLAE
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP) TS




SS


STTGGG






TT
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence RCRTPQEKVTVKKTLEKVMKLEAIGSVTWTKGMRRLSVLVSSCLKNKEPVLLVGETGCGKTTICQLLAQF
Predicted secondary structure























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Known secondary structure (DSSP) TTT
SSS





SS

SS


B
B
S
TTSS
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence MGRELITLNAHQNTETGDILGAQRPVRNRSEIQYKLIKSLKTALNIANAEDVQLEIQKLRDSLNVLFEWS
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) SSS






SSS

S
BS






B
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence DGPLIQAMRTGNFFLLDEISLADDSVLERLNSVLEPERSLLLAEQGSSDSLVTASENFQFFATMNPGGDY
Predicted secondary structure



































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Known secondary structure (DSSP)

S
ST
TTS
TSTTTSS


SSS


TT



TTSS
 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence GKKELSPALRNRFTEIWVPSMEDFNDVNMIVSSRLLEDLKDLANPIVKFSEWFGKNATSGVISLRDILAW
Predicted secondary structure






























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Known secondary structure (DSSP) SGGG

STTTSSSB









TTTTSS
SS

 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence VEFINKVFPKIQNKSTALIQGASMVFIDALGTNNTAYLAENENDLKSLFNLTAPTTASNLVRVVRAMQVH
Predicted secondary structure




































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Known secondary structure (DSSP) S

SS

SSSTTTTS

S





SSGGGTT
 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence KPILLEGSPGVGKTSLITALANITGNKLTRINLSEQTDLVDLFGAHDAPFLRAMKKGEWVLLDEMNLASQ
Predicted secondary structure


































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Known secondary structure (DSSP) SB



TTSSSTT



BTTTS
STTTS




TTTTTTTTSSBT
SSS
S
 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence SVLEGLNACLDHRGEAYIISFSCHPNFLVFAAQNPKGLPKSFVNRFSVVFIDMLTSDDLLLIAKHLYPSI
Predicted secondary structure

























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Known secondary structure (DSSP) STTTSSS






TT






TSS






TTTSS
SS
 .........1550.........1560.........1570.........1580.........1590.........1600.........1610
Sequence EPDIIAKMIKLMSTLEDQVCKRKLWGNSGSPWEFNLRDTLRWLKLLNQYSICEDVDVFDFVDIIVKQRFR
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) S

TT
SS

SS




S
SSSSSS

SSGGGGTTTTTTS
 .........1620.........1630.........1640.........1650.........1660.........1670.........1680
Sequence TISDKNKAQLLIEDIFGKFSTKENFFKLTEDYVQINNEVALRNPHYRYPITQNLFPLECNVAVYESVLKA
Predicted secondary structure
































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Known secondary structure (DSSP) SSGGGGS












SS
TT


SS




SS




SS
 .........1690.........1700.........1710.........1720.........1730.........1740.........1750
Sequence INNNWPLVLVGPSNSGKTETIRFLASILGPRVDVFSMNSDIDSMDILGGYEQVDLTRQISYITEELTNIV
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP) TT


SS
S
TTT



SS

SSS
S
 .........1760.........1770.........1780.........1790.........1800.........1810.........1820
Sequence REIISMNMKLSPNATAIMEGLNLLKYLLNNIVTPEKFQDFRNRFNRFFSHLEGHPLLKTMSMNIEKMTEI
Predicted secondary structure











SS confidence





































































Known secondary structure (DSSP) TTSS


S


S
TTTS

SS
 .........1830.........1840.........1850.........1860.........1870.........1880.........1890
Sequence ITKEASVKFEWFDGMLVKAVEKGHWLILDNANLCSPSVLDRLNSLLEIDGSLLIQPRVLKPHPNFRLFLT
Predicted secondary structure
























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Known secondary structure (DSSP) GGGTS
S


T
SSSSS
TTSGGGGGTTSSSSS











SS

 .........1900.........1910.........1920.........1930.........1940.........1950.........1960
Sequence MDPKYGELSRAMRNRGVEIYIDELHSRSTAFDRLTLGFPDMSIPLKHYVPSYLSRPCIFAQVHDILLLSD
Predicted secondary structure












SS confidence





































































Known secondary structure (DSSP)
TTS



TTSSSSS




TTTTTSS







TTSSS
TTSS
S
 .........1970.........1980.........1990.........2000.........2010.........2020.........2030
Sequence EEPIEESLAAVIPISHLGEVGKWANNVLNCTEYSEKKIAERLYVFITFLTDMGVLEKINNLYKPANLKFQ
Predicted secondary structure

SS confidence





































































Known secondary structure (DSSP) S

TTTSSTTTS
STT
SS

S

TTTTTS
 .........2040.........2050.........2060.........2070.........2080.........2090.........2100
Sequence KALGLHDKQLTEETVSLTLNEYVLPTVSKYSDKIKSPESLYLLSSLRLLLNSLNALKLINEKSTHGKIDE
Predicted secondary structure





SS confidence





































































Known secondary structure (DSSP) S





SS



SSS
SST
SSS

SSSTTS
STT
 .........2110.........2120.........2130.........2140.........2150.........2160.........2170
Sequence LTYIELSAAAFNGRHLKNIPRIPIFCILYNILTVMSENLKTESLFCGSNQYQYYWDLLVIVIAALETAVT
Predicted secondary structure






SS confidence





































































Known secondary structure (DSSP)

TTSSS

SS

SS

TTTTTTTS




SSSTTSTTSS
 .........2180.........2190.........2200.........2210.........2220.........2230.........2240
Sequence KDEARLRVYKELIDSWIASVKSKSDIEITPFLNINLEFTDVLQLSRGHSITLLWDIFRKNYPTTSNSWLA
Predicted secondary structure










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Known secondary structure (DSSP)

GGGGGTTTTTTT
TT

SSTT


S
STTTTS





S
 .........2250.........2260.........2270.........2280.........2290.........2300.........2310
Sequence FEKLINLSEKFDKVRLLQFSESYNSIKDLMDVFRLLNDDVLNNKLSEFNLLLSKLEDGINELELISNKFL
Predicted secondary structure
SS confidence





































































Known secondary structure (DSSP) TT

TT
TTTTTT

SSTS
S
 .........2320.........2330.........2340.........2350.........2360.........2370.........2380
Sequence NKRKHYFADEFDNLIRYTFSVDTAELIKELAPASSLATQKLTKLITNKYNYPPIFDVLWTEFTSTIFSSQ
Predicted secondary structure







SS confidence





































































Known secondary structure (DSSP) S




STT
SSSSSSTTSS

TTTSS



S
TT




TTTSSS
 .........2390.........2400.........2410.........2420.........2430.........2440.........2450
Sequence FLEDVVRKSNNLKSFSGNQIKQSISDAELLLSSTIKCSPNLLKSQMEYYKNMLLSWLRKVIDIHVGGDCL
Predicted secondary structure






SS confidence





































































Known secondary structure (DSSP) TTSSS
TTSSSSSTTTTTTS
STTTTTTTSSS
SS
 .........2460.........2470.........2480.........2490.........2500.........2510.........2520
Sequence KLTLKELCSLIEEKTASETRVTFAEYIFPALDLAESSKSLEELGEAWITFGTGLLLLFVPDSPYDPAIHD
Predicted secondary structure









SS confidence





































































Known secondary structure (DSSP) S

TS
SSTTTTTS

STTTTT

SS


TT
 .........2530.........2540.........2550.........2560.........2570.........2580.........2590
Sequence YVLYDLFLKTKTFSQNLMKSWRNVRKVISGDEEIFTEKLINTISDDDAPQSPRVYRTGMSIDSLFDEWMA
Predicted secondary structure



SS confidence





































































Known secondary structure (DSSP) TTGGGGTSS
SS

S



SS





SS


SS
GGG
 .........2600.........2610.........2620.........2630.........2640.........2650.........2660
Sequence FLSSTMSSRQIKELVSSYKCNSDQSDRRLEMLQQNSAHFLNRLESGYSKFADLNDILAGYIYSINFGFDL
Predicted secondary structure
SS confidence





































































Known secondary structure (DSSP) TTTTSSTTT
S
TTSSSSS

 .........2670.........2680.........2690.........2700.........2710.........2720.........2730
Sequence LKLQKSKDRASFQISPLWSMDPINISCAENVLSAYHELSRFFKKGDMEDTSIEKVLMYFLTLFKFHKRDT
Predicted secondary structure








SS confidence





































































Known secondary structure (DSSP)

S



S

SS
TTTSS
TTSSSSS

TT
SSGGGTTTTTS
S
 .........2740.........2750.........2760.........2770.........2780.........2790.........2800
Sequence NLLEIFEAALYTLYSRWSVRRFRQEQYEADFRKLFNLDDIYFKLADTYISVFDKDHDANFSSELKSGAII
Predicted secondary structure







SS confidence





































































Known secondary structure (DSSP) STTTTTT



STTTS


TTTTTSSS




SSSSSTT
 .........2810.........2820.........2830.........2840.........2850.........2860.........2870
Sequence TTILSEDLKNTRIEELKSGSLSAVINTLDAETQSFKNTIDFYHDFSIPEFQKAGDIIETVLKSVLKLLKQ
Predicted secondary structure











SS confidence





































































Known secondary structure (DSSP) TTT

S






TTTT



TTT


TSSS
 .........2880.........2890.........2900.........2910.........2920.........2930.........2940
Sequence WPEHATLKELYRVSQEFLNYPIKTPLARQLQKIEQIYTYLAEWEKYASSEVSLNNTVKLITDLIVSWRKL
Predicted secondary structure









SS confidence





































































Known secondary structure (DSSP) S
S
STT

TT

S
TT


 .........2950.........2960.........2970.........2980.........2990.........3000.........3010
Sequence ELRTWKGLFNSEDAKTRKSIGKWWFYLYESIVISNFNATLLVSSLNLFFSKSTLGEFNARLDLVKAFYKH
Predicted secondary structure







SS confidence





































































Known secondary structure (DSSP) S
STTTTTTSTTTT

S
BSTTS
 .........3020.........3030.........3040.........3050.........3060.........3070.........3080
Sequence IQLIGLRSSKIAGLLHNTIKFYYQFKPLIDERITNGKKSLEKEIDDIILLASWKDVNVDALKQSSRKSHN
Predicted secondary structure





SS confidence





































































Known secondary structure (DSSP) TT
TT
SSTTTTTS

SS

 .........3090.........3100.........3110.........3120.........3130.........3140.........3150
Sequence NLYKIVRKYRDLLNGDAKTIIEAGLLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNIDTVASNMDS
Predicted secondary structure








SS confidence





































































Known secondary structure (DSSP) SSBS














TTS







TTT


STT
 .........3160.........3170.........3180.........3190.........3200.........3210.........3220
Sequence YLEKISSQEFPNFADLASDFYAEAERLRKETPNVYRLAYLKTQKSKLLGDALKELRRIGLDIQKVQSSTT
Predicted secondary structure








SS confidence





































































Known secondary structure (DSSP) T




ST





S



TTT
SS
 .........3230.........3240.........3250.........3260.........3270.........3280.........3290
Sequence TILANIAPFNNEYLNSSDAFFFKILDLLPKLRSAAVAAIERGMALAQSLMFSLITVRHPLSEFTNDYCKI
Predicted secondary structure










SS confidence





































































Known secondary structure (DSSP) TTS




STT
GGGGGTTTTTTTS


TT
 .........3300.........3310.........3320.........3330.........3340.........3350.........3360
Sequence NGMMLDLEHFTCLKGDIVHSSLKANVDNVRLFEKWLPSLLDYAAQTLSVISKYSATSEQQKILLDAKSTL
Predicted secondary structure





SS confidence





































































Known secondary structure (DSSP) TTS

S


TTTSSTTSS

GGGTT
 .........3370.........3380.........3390.........3400.........3410.........3420.........3430
Sequence SSFFVHFNSSRIFDSSFIESYSRFELFINELLKKLENAKETGNAFVFDIIIEWIKANKEDVEQAFRRTFT
Predicted secondary structure





SS confidence





































































Known secondary structure (DSSP) TTTTS
SS

GGGTSSSS
STT

 .........3440.........3450.........3460.........3470.........3480.........3490.........3500
Sequence SIILSFQKVIGDGIESTDDNWLSASFKKVMVNVKLLRSSVVSKNIETALSLLKDFDFTTTESIYVKSVIS
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP) TTTS





S


SS


STTSTTTT
 .........3510.........3520.........3530.........3540....
Sequence FTLPVITRYYNAMTVVLERSRIYYTNTSRGMYILSTILHSLAKN
Predicted secondary structure

SS confidence











































Known secondary structure (DSSP) TSTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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