1 c3c0rC_
100.0
24
PDB header: cell cycle, hydrolaseChain: C: PDB Molecule: ubiquitin thioesterase otu1;PDBTitle: structure of ovarian tumor (otu) domain in complex with ubiquitin
2 c3pfyA_
100.0
32
PDB header: hydrolaseChain: A: PDB Molecule: otu domain-containing protein 5;PDBTitle: the catalytic domain of human otud5
3 c3pt2A_
99.9
20
PDB header: hydrolase/protein bindingChain: A: PDB Molecule: rna polymerase;PDBTitle: structure of a viral otu domain protease bound to ubiquitin
4 c3phuA_
99.8
21
PDB header: hydrolaseChain: A: PDB Molecule: rna-directed rna polymerase l;PDBTitle: otu domain of crimean congo hemorrhagic fever virus
5 c2zfyA_
99.4
33
PDB header: hydrolaseChain: A: PDB Molecule: ubiquitin thioesterase otub1;PDBTitle: crystal structure of human otubain 1
6 c4dhjL_
99.4
24
PDB header: hydrolase/signaling protein/ligaseChain: L: PDB Molecule: ubiquitin thioesterase otubain-like;PDBTitle: the structure of a ceotub1 ubiquitin aldehyde ubc13~ub complex
7 d1tffa_
99.3
21
Fold: Cysteine proteinasesSuperfamily: Cysteine proteinasesFamily: Ubiquitin thiolesterase protein OTUB2 (Otubain-2)8 c4a4fA_
97.2
29
PDB header: rna binding proteinChain: A: PDB Molecule: survival of motor neuron-related-splicing factor 30;PDBTitle: solution structure of spf30 tudor domain in complex with2 symmetrically dimethylated arginine
9 d2d9ta1
97.1
28
Fold: SH3-like barrelSuperfamily: Tudor/PWWP/MBTFamily: Tudor domain10 d1mhna_
96.9
26
Fold: SH3-like barrelSuperfamily: Tudor/PWWP/MBTFamily: Tudor domain11 c2d9tA_
96.8
28
PDB header: structural genomics, unknown functionChain: A: PDB Molecule: tudor domain-containing protein 3;PDBTitle: solution structure of the tudor domain of tudor domain2 containing protein 3 from mouse
12 c3pnwX_
96.4
27
PDB header: protein binding/immune systemChain: X: PDB Molecule: tudor domain-containing protein 3;PDBTitle: crystal structure of the tudor domain of human tdrd3 in complex with2 an anti-tdrd3 fab
13 c3dkbA_
96.4
16
PDB header: hydrolaseChain: A: PDB Molecule: tumor necrosis factor, alpha-induced protein 3;PDBTitle: crystal structure of a20, 2.5 angstrom
14 c1g5vA_
96.1
25
PDB header: translationChain: A: PDB Molecule: survival motor neuron protein 1;PDBTitle: solution structure of the tudor domain of the human smn2 protein
15 c2vfjA_
95.4
13
PDB header: hydrolaseChain: A: PDB Molecule: tumor necrosis factor;PDBTitle: structure of the a20 ovarian tumour (otu) domain
16 d2diqa1
94.5
21
Fold: SH3-like barrelSuperfamily: Tudor/PWWP/MBTFamily: Tudor domain17 c2hqxB_
93.7
13
PDB header: transcriptionChain: B: PDB Molecule: p100 co-activator tudor domain;PDBTitle: crystal structure of human p100 tudor domain conserved2 region
18 d2hqxa1
93.7
13
Fold: SH3-like barrelSuperfamily: Tudor/PWWP/MBTFamily: Tudor domain19 c2eqkA_
92.1
13
PDB header: transcriptionChain: A: PDB Molecule: tudor domain-containing protein 4;PDBTitle: solution structure of the tudor domain of tudor domain-2 containing protein 4
20 c2wacA_
92.0
24
PDB header: splicingChain: A: PDB Molecule: cg7008-pa;PDBTitle: extended tudor domain of drosophila melanogaster tudor-sn (2 p100)
21 c3qiiA_
not modelled
91.6
19
PDB header: transcription regulatorChain: A: PDB Molecule: phd finger protein 20;PDBTitle: crystal structure of tudor domain 2 of human phd finger protein 20
22 c3p8dB_
not modelled
91.4
19
PDB header: protein bindingChain: B: PDB Molecule: medulloblastoma antigen mu-mb-50.72;PDBTitle: crystal structure of the second tudor domain of human phf20 (homodimer2 form)
23 c2equA_
not modelled
90.0
22
PDB header: protein bindingChain: A: PDB Molecule: phd finger protein 20-like 1;PDBTitle: solution structure of the tudor domain of phd finger2 protein 20-like 1
24 c3bdlA_
not modelled
85.8
15
PDB header: hydrolaseChain: A: PDB Molecule: staphylococcal nuclease domain-containingPDBTitle: crystal structure of a truncated human tudor-sn
25 c3zrhA_
not modelled
85.5
21
PDB header: hydrolaseChain: A: PDB Molecule: ubiquitin thioesterase zranb1;PDBTitle: crystal structure of the lys29, lys33-linkage-specific trabid otu2 deubiquitinase domain reveals an ankyrin-repeat ubiquitin binding3 domain (ankubd)
26 d2i8da1
not modelled
74.4
22
Fold: Secretion chaperone-likeSuperfamily: YdhG-likeFamily: YdhG-like27 c1xniI_
not modelled
70.0
18
PDB header: cell cycleChain: I: PDB Molecule: tumor suppressor p53-binding protein 1;PDBTitle: tandem tudor domain of 53bp1
28 d1ccda_
not modelled
69.6
20
Fold: Uteroglobin-likeSuperfamily: Uteroglobin-likeFamily: Uteroglobin-like29 c1puoA_
not modelled
67.9
17
PDB header: allergenChain: A: PDB Molecule: major allergen i polypeptide, fused chain 2,PDBTitle: crystal structure of fel d 1- the major cat allergen
30 c3nthA_
not modelled
65.2
13
PDB header: transcriptionChain: A: PDB Molecule: maternal protein tudor;PDBTitle: crystal structure of tudor and aubergine [r13(me2s)] complex
31 c3db3A_
not modelled
63.6
14
PDB header: ligaseChain: A: PDB Molecule: e3 ubiquitin-protein ligase uhrf1;PDBTitle: crystal structure of the tandem tudor domains of the e3 ubiquitin-2 protein ligase uhrf1 in complex with trimethylated histone h3-k93 peptide
32 d1utra_
not modelled
59.7
20
Fold: Uteroglobin-likeSuperfamily: Uteroglobin-likeFamily: Uteroglobin-like33 d1wn7a2
57.7
18
Fold: DNA/RNA polymerasesSuperfamily: DNA/RNA polymerasesFamily: DNA polymerase I34 c2jvvA_
not modelled
57.2
23
PDB header: transcriptionChain: A: PDB Molecule: transcription antitermination protein nusg;PDBTitle: solution structure of e. coli nusg carboxyterminal domain
35 c2kvqG_
not modelled
57.2
23
PDB header: transcriptionChain: G: PDB Molecule: transcription antitermination protein nusg;PDBTitle: solution structure of nuse:nusg-ctd complex
36 d1utga_
not modelled
55.6
13
Fold: Uteroglobin-likeSuperfamily: Uteroglobin-likeFamily: Uteroglobin-like37 c3q1jA_
not modelled
54.0
28
PDB header: transcriptionChain: A: PDB Molecule: phd finger protein 20;PDBTitle: crystal structure of tudor domain 1 of human phd finger protein 20
38 d1nppa2
not modelled
53.5
21
Fold: SH3-like barrelSuperfamily: Translation proteins SH3-like domainFamily: N-utilization substance G protein NusG, C-terminal domain39 d2guka1
not modelled
53.0
18
Fold: PG1857-likeSuperfamily: PG1857-likeFamily: PG1857-like40 c2o4xA_
not modelled
52.9
15
PDB header: hydrolaseChain: A: PDB Molecule: staphylococcal nuclease domain-containingPDBTitle: crystal structure of human p100 tudor domain
41 d1nz9a_
not modelled
51.7
23
Fold: SH3-like barrelSuperfamily: Translation proteins SH3-like domainFamily: N-utilization substance G protein NusG, C-terminal domain42 d1poia_
not modelled
51.1
20
Fold: NagB/RpiA/CoA transferase-likeSuperfamily: NagB/RpiA/CoA transferase-likeFamily: CoA transferase alpha subunit-like43 c2zfuA_
not modelled
49.9
16
PDB header: nuclear proteinChain: A: PDB Molecule: cerebral protein 1;PDBTitle: structure of the methyltransferase-like domain of nucleomethylin
44 d1vhka1
not modelled
49.8
17
Fold: PUA domain-likeSuperfamily: PUA domain-likeFamily: YggJ N-terminal domain-like45 c2xzmL_
not modelled
47.7
38
PDB header: ribosomeChain: L: PDB Molecule: 40s ribosomal protein s12;PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1
46 c1ssfA_
not modelled
44.0
16
PDB header: cell cycleChain: A: PDB Molecule: transformation related protein 53 bindingPDBTitle: solution structure of the mouse 53bp1 fragment (residues2 1463-1617)
47 c2zmeB_
not modelled
42.9
23
PDB header: protein transportChain: B: PDB Molecule: vacuolar protein-sorting-associated protein 36;PDBTitle: integrated structural and functional model of the human escrt-ii2 complex
48 d1nxza1
not modelled
42.3
14
Fold: PUA domain-likeSuperfamily: PUA domain-likeFamily: YggJ N-terminal domain-like49 d2oc6a1
not modelled
41.7
19
Fold: Secretion chaperone-likeSuperfamily: YdhG-likeFamily: YdhG-like50 c3askC_
not modelled
41.2
14
PDB header: ligase/dna binding proteinChain: C: PDB Molecule: e3 ubiquitin-protein ligase uhrf1;PDBTitle: structure of uhrf1 in complex with histone tail
51 c2kl4A_
not modelled
40.8
32
PDB header: structural genomics, unknown functionChain: A: PDB Molecule: bh2032 protein;PDBTitle: nmr structure of the protein nb7804a
52 d2f5ka1
not modelled
40.1
14
Fold: SH3-like barrelSuperfamily: Chromo domain-likeFamily: Chromo barrel domain53 c2egwB_
not modelled
35.3
17
PDB header: rna methyltransferaseChain: B: PDB Molecule: upf0088 protein aq_165;PDBTitle: crystal structure of rrna methyltransferase with sah ligand
54 c3nafA_
not modelled
34.8
12
PDB header: ion transportChain: A: PDB Molecule: calcium-activated potassium channel subunit alpha-1;PDBTitle: structure of the intracellular gating ring from the human high-2 conductance ca2+ gated k+ channel (bk channel)
55 d2g7sa2
not modelled
34.3
14
Fold: Tetracyclin repressor-like, C-terminal domainSuperfamily: Tetracyclin repressor-like, C-terminal domainFamily: Tetracyclin repressor-like, C-terminal domain56 c3kopB_
not modelled
33.1
22
PDB header: structural genomics, unknown functionChain: B: PDB Molecule: uncharacterized protein;PDBTitle: crystal structure of protein with a cyclophilin-like fold2 (yp_831253.1) from arthrobacter sp. fb24 at 1.90 a resolution
57 c2db0B_
not modelled
33.0
12
PDB header: protein bindingChain: B: PDB Molecule: 253aa long hypothetical protein;PDBTitle: crystal structure of ph0542
58 d2cp6a1
not modelled
33.0
23
Fold: SH3-like barrelSuperfamily: Cap-Gly domainFamily: Cap-Gly domain59 c2ro0A_
not modelled
32.1
21
PDB header: transferaseChain: A: PDB Molecule: histone acetyltransferase esa1;PDBTitle: solution structure of the knotted tudor domain of the yeast2 histone acetyltransferase, esa1
60 c1zv4X_
not modelled
31.9
9
PDB header: signaling proteinChain: X: PDB Molecule: regulator of g-protein signaling 17;PDBTitle: structure of the regulator of g-protein signaling 17 (rgsz2)
61 c2zkql_
not modelled
31.6
41
PDB header: ribosomal protein/rnaChain: L: PDB Molecule: PDBTitle: structure of a mammalian ribosomal 40s subunit within an 80s complex2 obtained by docking homology models of the rna and proteins into an3 8.7 a cryo-em map
62 d1wgsa_
not modelled
31.4
21
Fold: SH3-like barrelSuperfamily: Chromo domain-likeFamily: Chromo barrel domain63 c2ec3A_
not modelled
31.0
20
PDB header: cell adhesionChain: A: PDB Molecule: fibronectin;PDBTitle: solution structure of the 11th fn1 domain from human2 fibronectin 1
64 c2eqmA_
not modelled
30.9
28
PDB header: transcriptionChain: A: PDB Molecule: phd finger protein 20-like 1;PDBTitle: solution structure of the tudor domain of phd finger2 protein 20-like 1 [homo sapiens]
65 d1v38a_
not modelled
29.4
29
Fold: SAM domain-likeSuperfamily: SAM/Pointed domainFamily: SAM (sterile alpha motif) domain66 c2py8B_
not modelled
28.5
13
PDB header: chaperoneChain: B: PDB Molecule: hypothetical protein rbcx;PDBTitle: rbcx
67 d3bl2a1
not modelled
27.9
31
Fold: Toxins' membrane translocation domainsSuperfamily: Bcl-2 inhibitors of programmed cell deathFamily: Bcl-2 inhibitors of programmed cell death68 c3m1rF_
not modelled
27.6
21
PDB header: hydrolaseChain: F: PDB Molecule: formimidoylglutamase;PDBTitle: the crystal structure of formimidoylglutamase from bacillus2 subtilis subsp. subtilis str. 168
69 c3s63B_
not modelled
27.1
29
PDB header: lipid binding proteinChain: B: PDB Molecule: saposin-like protein;PDBTitle: saposin-like protein na-slp-1
70 c1m1gB_
not modelled
26.2
20
PDB header: transcriptionChain: B: PDB Molecule: transcription antitermination protein nusg;PDBTitle: crystal structure of aquifex aeolicus n-utilization2 substance g (nusg), space group p2(1)
71 c1ofsC_
not modelled
25.7
19
PDB header: lectinChain: C: PDB Molecule: pea lectin alpha chain;PDBTitle: pea lectin-sucrose complex
72 c2penE_
not modelled
25.3
21
PDB header: chaperoneChain: E: PDB Molecule: orf134;PDBTitle: crystal structure of rbcx, crystal form i
73 d2ejna1
not modelled
25.3
16
Fold: Uteroglobin-likeSuperfamily: Uteroglobin-likeFamily: Uteroglobin-like74 c1w7pD_
not modelled
25.0
20
PDB header: protein transportChain: D: PDB Molecule: vps36p, ylr417w;PDBTitle: the crystal structure of endosomal complex escrt-ii2 (vps22/vps25/vps36)
75 c2ekoA_
not modelled
25.0
17
PDB header: transferaseChain: A: PDB Molecule: histone acetyltransferase htatip;PDBTitle: solution structure of ruh-073, a pseudo chromo domain from2 human cdna
76 c1ngmM_
not modelled
24.1
28
PDB header: transcription/dnaChain: M: PDB Molecule: transcription initiation factor tfiid;PDBTitle: crystal structure of a yeast brf1-tbp-dna ternary complex
77 c1rm1A_
not modelled
24.1
28
PDB header: transcription/dnaChain: A: PDB Molecule: tata-box binding protein;PDBTitle: structure of a yeast tfiia/tbp/tata-box dna complex
78 d2pbla1
not modelled
23.9
10
Fold: alpha/beta-HydrolasesSuperfamily: alpha/beta-HydrolasesFamily: Carboxylesterase79 c3iuwA_
not modelled
23.9
16
PDB header: rna binding proteinChain: A: PDB Molecule: activating signal cointegrator;PDBTitle: crystal structure of activating signal cointegrator (np_814290.1) from2 enterococcus faecalis v583 at 1.58 a resolution
80 d2do3a1
not modelled
23.8
8
Fold: SH3-like barrelSuperfamily: Translation proteins SH3-like domainFamily: SPT5 KOW domain-like81 c1s1hL_
not modelled
23.5
38
PDB header: ribosomeChain: L: PDB Molecule: 40s ribosomal protein s23;PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1h,4 contains 40s subunit. the 60s ribosomal subunit is in file5 1s1i.
82 c3fwcN_
not modelled
22.0
18
PDB header: cell cycle, transcriptionChain: N: PDB Molecule: nuclear mrna export protein sac3;PDBTitle: sac3:sus1:cdc31 complex
83 c2lbaA_
not modelled
21.5
9
PDB header: lipid binding proteinChain: A: PDB Molecule: babp protein;PDBTitle: solution structure of chicken ileal babp in complex with2 glycochenodeoxycholic acid
84 d2peqa1
not modelled
21.2
21
Fold: RbcX-likeSuperfamily: RbcX-likeFamily: RbcX-like85 d1nh2a2
not modelled
20.7
23
Fold: TBP-likeSuperfamily: TATA-box binding protein-likeFamily: TATA-box binding protein (TBP), C-terminal domain86 d1w98b1
not modelled
20.6
10
Fold: Cyclin-likeSuperfamily: Cyclin-likeFamily: Cyclin87 d1i94l_
not modelled
20.5
32
Fold: OB-foldSuperfamily: Nucleic acid-binding proteinsFamily: Cold shock DNA-binding domain-like88 c3pzlA_
not modelled
20.2
18
PDB header: hydrolaseChain: A: PDB Molecule: agmatine ureohydrolase;PDBTitle: the crystal structure of agmatine ureohydrolase of thermoplasma2 volcanium
89 c3labA_
not modelled
20.1
18
PDB header: PDB COMPND: 90 c3kw2A_
not modelled
19.9
24
PDB header: transferaseChain: A: PDB Molecule: probable r-rna methyltransferase;PDBTitle: crystal structure of probable rrna-methyltransferase from2 porphyromonas gingivalis
91 d1svma_
not modelled
19.4
8
Fold: P-loop containing nucleoside triphosphate hydrolasesSuperfamily: P-loop containing nucleoside triphosphate hydrolasesFamily: Extended AAA-ATPase domain92 d2py8a1
not modelled
19.2
11
Fold: RbcX-likeSuperfamily: RbcX-likeFamily: RbcX-like93 d1vg5a_
not modelled
18.6
33
Fold: RuvA C-terminal domain-likeSuperfamily: UBA-likeFamily: UBA domain94 c3lhlA_
not modelled
18.4
24
PDB header: hydrolaseChain: A: PDB Molecule: putative agmatinase;PDBTitle: crystal structure of a putative agmatinase from clostridium difficile
95 c1qu2A_
not modelled
18.3
22
PDB header: ligase/rnaChain: A: PDB Molecule: isoleucyl-trna synthetase;PDBTitle: insights into editing from an ile-trna synthetase structure2 with trna(ile) and mupirocin
96 c2eamA_
not modelled
17.9
33
PDB header: signaling proteinChain: A: PDB Molecule: putative 47 kda protein;PDBTitle: solution structure of the n-terminal sam-domain of a human2 putative 47 kda protein
97 d1tgoa2
not modelled
17.7
18
Fold: DNA/RNA polymerasesSuperfamily: DNA/RNA polymerasesFamily: DNA polymerase I98 c3df0C_
not modelled
17.6
24
PDB header: hydrolaseChain: C: PDB Molecule: calpastatin;PDBTitle: calcium-dependent complex between m-calpain and calpastatin
99 d1cdwa2
not modelled
17.6
24
Fold: TBP-likeSuperfamily: TATA-box binding protein-likeFamily: TATA-box binding protein (TBP), C-terminal domain
