PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2zkql_

Fold library id	PDB Header	Molecule	Title
c2zkql_	PDB header: ribosomal protein/rna	Chain: L: PDB Molecule:	PDBTitle: structure of a mammalian ribosomal 40s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map

Links to external resources
Added to library: Tue Mar 16 12:00:09 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Q Y K K A H L G T A L K A N P F G G A S H A K G I V L E K V G V E A K Q P N S A I R K C V R V Q L I K N G K K I T A F V P N D G C L N F I E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S T T
S
T T
S G G G
S S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . .

Sequence E N D E V L V A G F G R K G H A V G D I P G V R F K V V K V A N V S L L A L Y K G K K E R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S S S S S
B T T B T T
T T S T T S
S T T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	Y	K	K	A	H	L	G	T	A	L	K	A	N	P	F	G	G	A	S	H	A	K	G	I	V	L	E	K	V	G	V	E	A	K	Q	P	N	S	A	I	R	K	C	V	R	V	Q	L	I	K	N	G	K	K	I	T	A	F	V	P	N	D	G	C	L	N	F	I	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S												S	T	T		S																T	T													S	G	G	G									S	S		S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Sequence	E	N	D	E	V	L	V	A	G	F	G	R	K	G	H	A	V	G	D	I	P	G	V	R	F	K	V	V	K	V	A	N	V	S	L	L	A	L	Y	K	G	K	K	E	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T							S	S	S	S	S	S			B	T	T	B	T	T							T	T	S	T	T	S		S	T	T	T	T