Fold library entry viewer: c3nafA_

Added to library: Sat Aug 28 21:40:56 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	Y	G	G	S	Y	S	A	V	S	G	R	K	H	I	V	V	C	G	H	I	T	L	E	S	V	S	N	F	L	K	D	F	L	H	K	D	R	D	D	V	N	V	E	I	V	F	L	H	N	I	S	P	N	L	E	L	E	A	L	F	K	R	H	F	T	Q	V	E	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S						S	S							S															T		T	T	S												S	S													T	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	Q	G	S	V	L	N	P	H	D	L	A	R	V	K	I	E	S	A	D	A	C	L	I	L	A	N	K	Y	C	A	D	P	D	A	E	D	A	S	N	I	M	R	V	I	S	I	K	N	Y	H	P	K	I	R	I	I	T	Q	M	L	Q	Y	H	N	K	A	H	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	S							T	T	G	G	G		S								T	T		S																				S	T	T								S		T	T	G	G	G	S	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	I	P	S	W	N	W	K	E	G	D	D	A	I	C	L	A	E	L	K	L	G	F	I	A	Q	S	C	L	A	Q	G	L	S	T	M	L	A	N	L	F	S	M	R	S	F	I	K	I	E	E	D	T	W	Q	K	Y	Y	L	E	G	V	S	N	E	M	Y	T	E	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G		T	T			T	T	T	T																				S	T	T										S									S		S										T	B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	S	S	A	F	V	G	L	S	F	P	T	V	C	E	L	C	F	V	K	L	K	L	L	M	I	A	I	E	Y	K	S	A	N	R	E	S	R	I	L	I	N	P	G	N	H	L	K	I	Q	E	G	T	L	G	F	F	I	A	S	D	A	K	E	V	K	R	A	F	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G	T	T		B												T												S	S	S							S			T	T		B			T	T								B	T	T	T	G	G	G	G	G	G	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Y	C	K	A	C	H	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	S	P	K	L	M	R	H	D	K	K	Y	D	S	T	G	M	F	H	W	C	A	P	K	E	I	E	K	V	I	L	T	R	S	E	A	A	M	T	V	L	S	G	H	V	V	V	C	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S						G	G	G	G	G	G	S			S															B		T	T	S		S	B							G	G	G	T	B									S				S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	F	G	D	V	S	S	A	L	I	G	L	R	N	L	V	M	P	L	R	A	S	N	F	H	Y	H	E	L	K	H	I	V	F	V	G	S	I	E	Y	L	K	R	E	W	E	T	L	H	N	F	P	K	V	S	I	L	P	G	T	P	L	S	R	A	D	L	R	A	V	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	S					T										S	S	S		S	T	T								B										T	T	T	T	T	S	S	S			B		B	S		T	T								T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	I	N	L	C	D	M	C	V	I	L	S	A	N	Q	N	N	I	D	D	T	S	L	Q	D	K	E	C	I	L	A	S	L	N	I	K	S	M	Q	F	D	T	G	V	N	I	P	I	I	T	E	L	V	N	D	T	N	V	Q	F	L	D	Q	D	D	D	D	D	P	D	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T		S							S	S		T	T				S	S	S	T	T																		T	T									S	S	T	T	G	G	G	G	G	S			T	T			T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	E	L	Y	L	T	Q	P	F	A	C	G	T	A	F	A	V	S	V	L	D	S	L	M	S	A	T	Y	F	N	D	N	I	L	T	L	I	R	T	L	V	T	G	G	A	T	P	E	L	E	A	L	I	A	E	E	N	A	L	R	G	G	Y	S	T	P	Q	T	L	A	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	S						T	S				T	T													T											S		S									T	T	T	S	S	S								T	T	G	G	G	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	R	D	R	C	R	V	A	Q	L	A	L	L	D	G	P	F	A	D	L	G	D	G	G	C	Y	G	D	L	F	C	K	A	L	K	T	Y	N	M	L	C	F	G	I	Y	R	L	R	D	A	H	L	S	T	P	S	Q	C	T	K	R	Y	V	I	T	N	P	P	Y	E	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T										S	T	T	S	S	T	T	T	T	T	T	T								T					T	T											S	T	T	S	S	S													S			T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.
Sequence	E	L	V	P	T	D	L	I	F	C	L	M	Q	F	D	H	N	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S

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PDB structure

FASTA sequence

Hidden Markov model

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