PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3kw2A_

Fold library id	PDB Header	Molecule	Title
c3kw2A_	PDB header: transferase	Chain: A: PDB Molecule: probable r-rna methyltransferase;	PDBTitle: crystal structure of probable rrna-methyltransferase from2 porphyromonas gingivalis

Links to external resources
Added to library: Sat Aug 28 20:30:44 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L P L F Y A P D I E Q S D R L P D D E A G H I L R V L R X Q A G D R L R L T D G R G S F F D A V I E T A D R K S C Y V S V C G Q E S W Q K P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T T
S B
T T S
T T
S B S
S S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence W R D R I T I A I A P T K Q S E R X E W X L E K L V E I G V D E V V F I E S E H S E R R R I K A E R L E R I A I S A X K Q S L K A S F P V I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S
S S
S
T T S
S
T T
S B

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R V N I P I Q T V I A D T P K A A V R L I A Y V D E A V R G R G Y P S D F Y H V G Q D V L I L I G P E G D F S P S E V E S A L L A G F A P V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T S
T T
G G G T
T T S
T T
T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240

Sequence S L G E S R L R T E T A G L V A C Q W I H T L Q A C Y R I G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	P	L	F	Y	A	P	D	I	E	Q	S	D	R	L	P	D	D	E	A	G	H	I	L	R	V	L	R	X	Q	A	G	D	R	L	R	L	T	D	G	R	G	S	F	F	D	A	V	I	E	T	A	D	R	K	S	C	Y	V	S	V	C	G	Q	E	S	W	Q	K	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T	T	T		S	B											T	T	S				T	T								S	B	S												S	S															S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	W	R	D	R	I	T	I	A	I	A	P	T	K	Q	S	E	R	X	E	W	X	L	E	K	L	V	E	I	G	V	D	E	V	V	F	I	E	S	E	H	S	E	R	R	R	I	K	A	E	R	L	E	R	I	A	I	S	A	X	K	Q	S	L	K	A	S	F	P	V	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		S										S	S																	S								T	T	S			S																		T	T		S	B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	V	N	I	P	I	Q	T	V	I	A	D	T	P	K	A	A	V	R	L	I	A	Y	V	D	E	A	V	R	G	R	G	Y	P	S	D	F	Y	H	V	G	Q	D	V	L	I	L	I	G	P	E	G	D	F	S	P	S	E	V	E	S	A	L	L	A	G	F	A	P	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S		T	T	S									T	T							G	G	G	T			T	T	S									T	T														T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence	S	L	G	E	S	R	L	R	T	E	T	A	G	L	V	A	C	Q	W	I	H	T	L	Q	A	C	Y	R	I	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S																						T