PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c2o4xA_

Fold library id	PDB Header	Molecule	Title
c2o4xA_	PDB header: hydrolase	Chain: A: PDB Molecule: staphylococcal nuclease domain-containing	PDBTitle: crystal structure of human p100 tudor domain

Links to external resources
Added to library: Tue Mar 16 13:12:57 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S A S Y K P V F V T E I T D D L H F Y V Q D V E T G T Q F E K L M E N M R N D I A S H P P V E G S Y A P R R G E F C I A K F V D G E W Y R A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S G G G S
T T S
T T
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R V E K V E S P A K I H V F Y I D Y G N R E V L P S T R L G T L S P A F S T R V L P A Q A T E Y A F A F I Q V P Q D D D A R T D A V D S V V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T
G G G
G G G S T T T S
T T
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R D I Q N T Q C L L N V E H L S A G C P H V T L Q F A D S K G D V G L G L V K E G L V M V E V R K E K Q F Q K V I T E Y L N A Q E S A K S A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S S
S T T
B T T S S
S G G G T

. . . . . . .

Sequence R L N L W R Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
G G G

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	A	S	Y	K	P	V	F	V	T	E	I	T	D	D	L	H	F	Y	V	Q	D	V	E	T	G	T	Q	F	E	K	L	M	E	N	M	R	N	D	I	A	S	H	P	P	V	E	G	S	Y	A	P	R	R	G	E	F	C	I	A	K	F	V	D	G	E	W	Y	R	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T	S							G	G	G																		S				T	T	S					T	T								T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	V	E	K	V	E	S	P	A	K	I	H	V	F	Y	I	D	Y	G	N	R	E	V	L	P	S	T	R	L	G	T	L	S	P	A	F	S	T	R	V	L	P	A	Q	A	T	E	Y	A	F	A	F	I	Q	V	P	Q	D	D	D	A	R	T	D	A	V	D	S	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T							T	T	T								G	G	G						G	G	G	S	T	T	T	S										T	T					S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	D	I	Q	N	T	Q	C	L	L	N	V	E	H	L	S	A	G	C	P	H	V	T	L	Q	F	A	D	S	K	G	D	V	G	L	G	L	V	K	E	G	L	V	M	V	E	V	R	K	E	K	Q	F	Q	K	V	I	T	E	Y	L	N	A	Q	E	S	A	K	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T												S	S	S								S	T	T			B								T	T	S	S							S	G	G	G																	T
	.	.	.	.	.	.	.
Sequence	R	L	N	L	W	R	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T		G	G	G