PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c2wacA_

Fold library id	PDB Header	Molecule	Title
c2wacA_	PDB header: splicing	Chain: A: PDB Molecule: cg7008-pa;	PDBTitle: extended tudor domain of drosophila melanogaster tudor-sn (2 p100)

Links to external resources
Added to library: Tue Mar 16 14:24:14 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M V N Y E N V I V T E I T E T L T F F A Q S V E S G S K L E S L M S K L H A D F Q S N P P I A G S Y T P K R G D L V A A Q F T L D N Q W Y R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S G G G S
T T S
T T
T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A K V E R V Q G S N A T V L Y I D Y G N K E T L P T N R L A A L P P A F S S E K P Y A T E Y A L A L V A L P T D N E D K E E A L R A F S E D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T
G G G
G G G S S S
S T T
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V L N H K V Q L N V E L K V T G S P N L A T L R D P T T K V D F G K Q L V A E G L V L A E Q R G E R K L K E L V D Q Y K A A Q E A A R V A H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B T
T T S
T T T
B T T S S
G G G T T

. . . . . . .

Sequence L A I W K Y G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	V	N	Y	E	N	V	I	V	T	E	I	T	E	T	L	T	F	F	A	Q	S	V	E	S	G	S	K	L	E	S	L	M	S	K	L	H	A	D	F	Q	S	N	P	P	I	A	G	S	Y	T	P	K	R	G	D	L	V	A	A	Q	F	T	L	D	N	Q	W	Y	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T	S							G	G	G																		S				T	T	S					T	T								T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	K	V	E	R	V	Q	G	S	N	A	T	V	L	Y	I	D	Y	G	N	K	E	T	L	P	T	N	R	L	A	A	L	P	P	A	F	S	S	E	K	P	Y	A	T	E	Y	A	L	A	L	V	A	L	P	T	D	N	E	D	K	E	E	A	L	R	A	F	S	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T							T	T	T								G	G	G						G	G	G	S	S	S			S							T	T					S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	L	N	H	K	V	Q	L	N	V	E	L	K	V	T	G	S	P	N	L	A	T	L	R	D	P	T	T	K	V	D	F	G	K	Q	L	V	A	E	G	L	V	L	A	E	Q	R	G	E	R	K	L	K	E	L	V	D	Q	Y	K	A	A	Q	E	A	A	R	V	A	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B	T												T	T	S									T	T	T			B								T	T	S	S								G	G	G																	T	T
	.	.	.	.	.	.	.
Sequence	L	A	I	W	K	Y	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	T	T