Email l.a.kelley@imperial.ac.uk Description P69856 Date Thu Jan 5 12:12:14 GMT 2012 Unique Job ID e51a5339a317d2ec

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2wjqA_ 100.0 100 PDB header:transport protein Chain: A: PDB Molecule:probable n-acetylneuraminic acid outer membrane channel PDBTitle: nanc porin structure in hexagonal crystal form. 2 c2iwvD_ 98.3 12 PDB header:ion channel Chain: D: PDB Molecule:outer membrane protein g; PDBTitle: structure of the monomeric outer membrane porin ompg in the2 open and closed conformation 3 c3qraA_ 97.8 14 PDB header:cell invasion Chain: A: PDB Molecule:attachment invasion locus protein; PDBTitle: the crystal structure of ail, the attachment invasion locus protein of2 yersinia pestis 4 d1g90a_ 97.6 14 Fold:Transmembrane beta-barrels Superfamily:OMPA-like Family:Outer membrane protein 5 c2f1tB_ 97.5 14 PDB header:membrane protein Chain: B: PDB Molecule:outer membrane protein w; PDBTitle: outer membrane protein ompw 6 d1t16a_ 97.5 15 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Outer membrane protein transport protein 7 c2k0lA_ 97.4 13 PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein a; PDBTitle: nmr structure of the transmembrane domain of the outer2 membrane protein a from klebsiella pneumoniae in dhpc3 micelles. 8 c3dwoX_ 97.3 12 PDB header:membrane protein Chain: X: PDB Molecule:probable outer membrane protein; PDBTitle: crystal structure of a pseudomonas aeruginosa fadl homologue 9 c3aehB_ 97.0 16 PDB header:hydrolase Chain: B: PDB Molecule:hemoglobin-binding protease hbp autotransporter; PDBTitle: integral membrane domain of autotransporter hbp 10 c3sljA_ 96.8 11 PDB header:protein transport Chain: A: PDB Molecule:serine protease espp; PDBTitle: pre-cleavage structure of the autotransporter espp - n1023a mutant 11 d1p4ta_ 96.8 13 Fold:Transmembrane beta-barrels Superfamily:OMPA-like Family:Outer membrane protein 12 c3nb3C_ 96.4 9 PDB header:virus Chain: C: PDB Molecule:outer membrane protein a; PDBTitle: the host outer membrane proteins ompa and ompc are packed at specific2 sites in the shigella phage sf6 virion as structural components 13 c3qq2C_ 96.3 9 PDB header:membrane protein/protein transport Chain: C: PDB Molecule:brka autotransporter; PDBTitle: crystal structure of the beta domain of the bordetella autotransporter2 brka 14 d1qjpa_ 96.2 9 Fold:Transmembrane beta-barrels Superfamily:OMPA-like Family:Outer membrane protein 15 c2jmmA_ 96.0 13 PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein a; PDBTitle: nmr solution structure of a minimal transmembrane beta-2 barrel platform protein 16 d2fgqx1 95.9 9 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Porin 17 c3brzA_ 95.7 11 PDB header:transport protein Chain: A: PDB Molecule:todx; PDBTitle: crystal structure of the pseudomonas putida toluene2 transporter todx 18 c2x27X_ 95.5 12 PDB header:membrane protein Chain: X: PDB Molecule:outer membrane protein oprg; PDBTitle: crystal structure of the outer membrane protein oprg from2 pseudomonas aeruginosa 19 d1osma_ 94.8 10 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Porin 20 c2qomB_ 93.7 10 PDB header:hydrolase Chain: B: PDB Molecule:serine protease espp; PDBTitle: the crystal structure of the e.coli espp autotransporter beta-domain. 21 d1qj8a_ not modelled 93.2 13 Fold:Transmembrane beta-barrels Superfamily:OMPA-like Family:Outer membrane protein 22 c2hdiA_ not modelled 93.1 13 PDB header:protein transport,antimicrobial protein Chain: A: PDB Molecule:colicin i receptor; PDBTitle: crystal structure of the colicin i receptor cir from e.coli in complex2 with receptor binding domain of colicin ia. 23 c3rbhC_ not modelled 92.5 16 PDB header:transport protein Chain: C: PDB Molecule:alginate production protein alge; PDBTitle: structure of alginate export protein alge from pseudomonas aeruginosa 24 d1a0tp_ not modelled 92.5 9 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Maltoporin-like 25 c3a2rX_ not modelled 92.4 10 PDB header:membrane protein Chain: X: PDB Molecule:outer membrane protein ii; PDBTitle: crystal structure of outer membrane protein porb from neisseria2 meningitidis 26 d1phoa_ not modelled 92.2 8 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Porin 27 d2vdfa1 not modelled 91.4 13 Fold:Transmembrane beta-barrels Superfamily:OMPT-like Family:Outer membrane adhesin/invasin OpcA 28 c3bryB_ not modelled 90.2 19 PDB header:transport protein Chain: B: PDB Molecule:tbux; PDBTitle: crystal structure of the ralstonia pickettii toluene2 transporter tbux 29 c3efmA_ not modelled 88.8 10 PDB header:membrane protein Chain: A: PDB Molecule:ferric alcaligin siderophore receptor; PDBTitle: structure of the alcaligin outer membrane recepteur faua from2 bordetella pertussis 30 c2lhfA_ not modelled 88.3 10 PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein h1; PDBTitle: solution structure of outer membrane protein h (oprh) from p.2 aeruginosa in dhpc micelles 31 c3nsgA_ not modelled 85.7 10 PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein f; PDBTitle: crystal structure of ompf, an outer membrane protein from salmonella2 typhi 32 c2y0kA_ not modelled 84.8 14 PDB header:transport protein Chain: A: PDB Molecule:pyroglutatmate porin opdo; PDBTitle: crystal structure of pseudomonas aeruginosa opdo 33 c3kvnA_ not modelled 82.9 15 PDB header:hydrolase Chain: A: PDB Molecule:esterase esta; PDBTitle: crystal structure of the full-length autotransporter esta from2 pseudomonas aeruginosa 34 d3prna_ not modelled 82.5 13 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Porin 35 c2y0hA_ not modelled 81.0 15 PDB header:transport protein Chain: A: PDB Molecule:probable porin; PDBTitle: crystal structure of pseudomonas aeruginosa opdl 36 d1uynx_ not modelled 78.0 12 Fold:Transmembrane beta-barrels Superfamily:Autotransporter Family:Autotransporter 37 d1af6a_ not modelled 74.7 14 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Maltoporin-like 38 d2zfga1 not modelled 59.8 9 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Porin 39 c3jtyB_ not modelled 59.2 12 PDB header:transport protein Chain: B: PDB Molecule:benf-like porin; PDBTitle: crystal structure of a benf-like porin from pseudomonas fluorescens2 pf-5 40 d2mpra_ not modelled 56.8 14 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Maltoporin-like 41 c1fw3A_ not modelled 56.2 17 PDB header:hydrolase, membrane protein Chain: A: PDB Molecule:outer membrane phospholipase a; PDBTitle: outer membrane phospholipase a from escherichia coli 42 c1xkwA_ not modelled 55.9 11 PDB header:membrane protein Chain: A: PDB Molecule:fe(iii)-pyochelin receptor; PDBTitle: pyochelin outer membrane receptor fpta from pseudomonas2 aeruginosa 43 d1fepa_ not modelled 49.9 13 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Ligand-gated protein channel 44 d2gufa1 not modelled 49.0 15 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Ligand-gated protein channel 45 c2odjA_ not modelled 47.6 14 PDB header:membrane protein Chain: A: PDB Molecule:porin d; PDBTitle: crystal structure of the outer membrane protein oprd from pseudomonas2 aeruginosa 46 d1by5a_ not modelled 44.9 14 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Ligand-gated protein channel 47 c2qtkB_ not modelled 39.9 13 PDB header:membrane protein Chain: B: PDB Molecule:probable porin; PDBTitle: crystal structure of the outer membrane protein opdk from2 pseudomonas aeruginosa 48 c2o4vA_ not modelled 36.9 17 PDB header:membrane protein Chain: A: PDB Molecule:porin p; PDBTitle: an arginine ladder in oprp mediates phosphate specific transfer across2 the outer membrane 49 d1k28d2 not modelled 35.3 15 Fold:Phage tail proteins Superfamily:Phage tail proteins Family:Baseplate protein-like 50 c2y0lA_ not modelled 31.0 11 PDB header:transport protein Chain: A: PDB Molecule:cis-aconitate porin opdh; PDBTitle: crystal structure of pseudomonas aeruginosa opdo 51 d2jnaa1 not modelled 24.9 20 Fold:Dodecin subunit-like Superfamily:YdgH-like Family:YdgH-like 52 c1pdjF_ not modelled 23.9 15 PDB header:structural protein Chain: F: PDB Molecule:baseplate structural protein gp27; PDBTitle: fitting of gp27 into cryoem reconstruction of bacteriophage2 t4 baseplate 53 c2ervA_ not modelled 20.9 14 PDB header:membrane protein Chain: A: PDB Molecule:hypothetical protein paer03002360; PDBTitle: crystal structure of the outer membrane enzyme pagl 54 c2eeyA_ not modelled 20.1 13 PDB header:biosynthetic protein Chain: A: PDB Molecule:molybdopterin biosynthesis; PDBTitle: structure of gk0241 protein from geobacillus kaustophilus 55 c2k4tA_ not modelled 19.0 17 PDB header:membrane protein,apoptosis Chain: A: PDB Molecule:voltage-dependent anion-selective channel PDBTitle: solution structure of human vdac-1 in ldao micelles 56 c3fhhA_ not modelled 18.5 8 PDB header:membrane protein Chain: A: PDB Molecule:outer membrane heme receptor shua; PDBTitle: crystal structure of the heme/hemoglobin outer membrane2 transporter shua from shigella dysenteriae 57 c3cslB_ not modelled 17.4 17 PDB header:membrane protein/heme binding protein Chain: B: PDB Molecule:hasr protein; PDBTitle: structure of the serratia marcescens hemophore receptor hasr in2 complex with its hemophore hasa and heme 58 d2jdih2 not modelled 15.2 33 Fold:Epsilon subunit of F1F0-ATP synthase N-terminal domain Superfamily:Epsilon subunit of F1F0-ATP synthase N-terminal domain Family:Epsilon subunit of F1F0-ATP synthase N-terminal domain 59 c2iahA_ not modelled 14.0 11 PDB header:membrane protein Chain: A: PDB Molecule:ferripyoverdine receptor; PDBTitle: crystal structure of the ferripyoverdine receptor of the outer2 membrane of pseudomonas aeruginosa bound to ferripyoverdine. 60 d1jeta_ not modelled 13.6 8 Fold:Periplasmic binding protein-like II Superfamily:Periplasmic binding protein-like II Family:Phosphate binding protein-like 61 c3t66A_ not modelled 9.4 14 PDB header:transport protein Chain: A: PDB Molecule:nickel abc transporter (nickel-binding protein); PDBTitle: crystal structure of nickel abc transporter from bacillus halodurans 62 d1uqwa_ not modelled 7.7 14 Fold:Periplasmic binding protein-like II Superfamily:Periplasmic binding protein-like II Family:Phosphate binding protein-like 63 c3o9pA_ not modelled 7.3 11 PDB header:peptide binding protein/peptide Chain: A: PDB Molecule:periplasmic murein peptide-binding protein; PDBTitle: the structure of the escherichia coli murein tripeptide binding2 protein mppa 64 c3rqtA_ not modelled 6.9 16 PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: 1.5 angstrom crystal structure of the complex of ligand binding2 component of abc-type import system from staphylococcus aureus with3 nickel and two histidines 65 d1kmoa_ not modelled 6.9 12 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Ligand-gated protein channel 66 c1xkhC_ not modelled 6.4 9 PDB header:membrane protein Chain: C: PDB Molecule:ferripyoverdine receptor; PDBTitle: pyoverdine outer membrane receptor fpva from pseudomonas aeruginosa2 pao1 bound to pyoverdine 67 d1zlqa1 not modelled 6.2 14 Fold:Periplasmic binding protein-like II Superfamily:Periplasmic binding protein-like II Family:Phosphate binding protein-like 68 c1qd6C_ not modelled 6.2 16 PDB header:membrane protein Chain: C: PDB Molecule:protein (outer membrane phospholipase (ompla)); PDBTitle: outer membrane phospholipase a from escherichia coli 69 c3ftoA_ not modelled 6.2 5 PDB header:peptide binding protein Chain: A: PDB Molecule:oligopeptide-binding protein oppa; PDBTitle: crystal structure of oppa in a open conformation 70 d1ks9a2 not modelled 6.2 21 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:6-phosphogluconate dehydrogenase-like, N-terminal domain 71 c2djmA_ not modelled 6.0 12 PDB header:sugar binding protein Chain: A: PDB Molecule:glucoamylase a; PDBTitle: solution structure of n-terminal starch-binding domain of2 glucoamylase from rhizopus oryzae 72 c3lznA_ not modelled 5.9 18 PDB header:transport protein Chain: A: PDB Molecule:p19 protein; PDBTitle: crystal structure analysis of the apo p19 protein from campylobacter2 jejuni at 1.59 a at ph 9 73 c1ztyA_ not modelled 5.9 3 PDB header:sugar binding protein, signaling protein Chain: A: PDB Molecule:chitin oligosaccharide binding protein; PDBTitle: crystal structure of the chitin oligasaccharide binding2 protein 74 d1xoca1 not modelled 5.8 16 Fold:Periplasmic binding protein-like II Superfamily:Periplasmic binding protein-like II Family:Phosphate binding protein-like 75 c3ry3B_ not modelled 5.8 14 PDB header:transport protein Chain: B: PDB Molecule:putative solute-binding protein; PDBTitle: putative solute-binding protein from yersinia pestis. 76 d1wdds_ not modelled 5.7 19 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 77 d1ynha1 not modelled 5.6 29 Fold:Pentein, beta/alpha-propeller Superfamily:Pentein Family:Succinylarginine dihydrolase-like 78 d1d5ra1 not modelled 5.3 11 Fold:C2 domain-like Superfamily:C2 domain (Calcium/lipid-binding domain, CaLB) Family:PLC-like (P variant) 79 c2grxB_ not modelled 5.2 10 PDB header:metal transport Chain: B: PDB Molecule:ferrichrome-iron receptor; PDBTitle: crystal structure of tonb in complex with fhua, e. coli2 outer membrane receptor for ferrichrome 80 c3na3A_ not modelled 5.2 10 PDB header:protein binding Chain: A: PDB Molecule:dna mismatch repair protein mlh1; PDBTitle: mutl protein homolog 1 isoform 1 from homo sapiens 81 d1ej7s_ not modelled 5.1 19 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit