Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: d1zlqa1

Fold library idFoldSuperfamilyFamily
d1zlqa1Periplasmic binding protein-like IIPeriplasmic binding protein-like IIPhosphate binding protein-like


Added to library: Tue Mar 16 13:17:42 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PDEITTAWPVNVGPLNPHLYTPNQMFAQSMVYEPLVKYQADGSVIPWLAKSWTHSEDGKTWTFTLRDDVK
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP)

SS


S

TT

TTS



S
TTS
SS
TTS

SS
B
 .........80.........90.........100.........110.........120.........130.........140
Sequence FSNGEPFDAEAAAENFRAVLDNRQRHAWLELANQIVDVKALSKTELQITLKSAYYPFLQELALPRPFRFI
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP)
TTS
B

TTGGGGTTSTSSSSSS

TTTSSSSS


 .........150.........160.........170.........180.........190.........200.........210
Sequence APSQFKNHETMNGIKAPIGTGPWILQESKLNQYDVFVRNENYWGEKPAIKKITFNVIPDPTTRAVAFETG
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP)
GGGTTSS


SSSTTT
TT
SS


S




TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence DIDLLYGNEGLLPLDTFARFSQNPAYHTQLSQPIETVMLALNTAKAPTNELAVREALNYAVNKKSLIDNA
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP) S
SSTTSS

TTS
TTSTTTTS

 .........290.........300.........310.........320.........330.........340.........350
Sequence LYGTQQVADTLFAPSVPYANLGLKPSQYDPQKAKALLEKAGWTLPAGKDIREKNGQPLRIELSFIGTDAL
Predicted secondary structure










































SS confidence





































































Known secondary structure (DSSP) STT
S

SSS
TTSTT










TT
B

TT
SS
TT
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence SKSMAEIIQADMRQIGADVSLIGEEESSIYARQRDGRFGMIFHRTWGAPYDPHAFLSSMRVPSHADFQAQ
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP) TTT

T

S


TTTTTGGG
TTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence QGLADKPLIDKEIGEVLATHDETQRQALYRDILTRLHDEAVYLPISYISMMVVSKPELGNIPYAPIATEI
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP) TT
TT


TT

GGG





SSTT

 .........
Sequence PFEQIKPVK
Predicted secondary structure


SS confidence








Known secondary structure (DSSP)
GGG

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D