Fold library entry viewer: d1xoca1

Added to library: Tue Mar 16 13:18:06 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	P	Q	Q	G	G	D	L	V	V	G	S	I	G	E	P	T	L	F	N	S	L	Y	S	T	D	D	A	S	T	D	I	E	N	M	L	Y	S	F	L	T	K	T	D	E	K	L	N	V	K	L	S	L	A	E	S	I	K	E	L	D	G	G	L	A	Y	D	V	K	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S	S					S		T	T	T			S														S					T	T	S					S	S								G	G	G	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	K	G	V	K	F	H	D	G	K	E	L	T	A	D	D	V	V	F	T	Y	S	V	P	L	S	K	D	Y	K	G	E	R	G	S	T	Y	E	M	L	K	S	V	E	K	K	G	D	Y	E	V	L	F	K	L	K	Y	K	D	G	N	F	Y	N	N	A	L	D	S	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S		B		T	T	S		B												G	G	G	S	T	T				S		G	G	G	T	T	T									T	T							S	S			T					T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	I	L	P	K	H	I	L	G	N	V	P	I	A	D	L	E	E	N	E	F	N	R	K	K	P	I	G	S	G	P	F	K	F	K	E	W	K	Q	G	Q	Y	I	K	L	E	A	N	D	D	Y	F	E	G	R	P	Y	L	D	T	V	T	Y	K	V	I	P	D	A	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	S		G	G	G	T	T	T	S	G	G	G	T	T					S	S	S								T	T	T								T	T		T	T				S	S	S								S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	A	E	A	Q	L	Q	A	G	D	I	N	F	F	N	V	P	A	T	D	Y	K	T	A	E	K	F	N	N	L	K	I	V	T	D	L	A	L	S	Y	V	Y	I	G	W	N	E	K	N	E	L	F	K	D	K	K	V	R	Q	A	L	T	T	A	L	D	R	E	S	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	S			B					G	G	G					T	T	S	T	T									S									T	T	S	G	G	G												T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	S	Q	V	L	D	G	D	G	E	V	A	Y	I	P	E	S	P	L	S	W	N	Y	P	K	D	I	D	V	P	K	F	E	Y	N	E	K	K	A	K	Q	M	L	A	E	A	G	W	K	D	T	N	G	D	G	I	L	D	K	D	G	K	K	F	S	F	T	L	K	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	T	T		S					S	S	S		T	T	S	T	T	S		T	T																				T	T		B		S	S	S	S	S	S				T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	N	Q	G	N	K	V	R	E	D	I	A	V	V	V	Q	E	Q	L	K	K	I	G	I	E	V	K	T	Q	I	V	E	W	S	A	L	V	E	Q	M	N	P	P	N	W	D	F	D	A	M	V	M	G	W	S	L	S	T	F	P	D	Q	Y	D	I	F	H	S	S	Q	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T																	T	T	T																		S	T	T	T				S										S	S			T					S	G	G	G	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	K	K	G	L	N	Y	V	W	Y	K	N	A	E	A	D	K	L	M	K	D	A	K	S	I	S	D	R	K	Q	Y	S	K	E	Y	E	Q	I	Y	Q	K	I	A	E	D	Q	P	Y	T	F	L	Y	Y	P	N	N	H	M	A	M	P	E	N	L	E	G	Y	K	Y	H	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	S		T	T															T	T			S																				S															T	T			S					S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.
Sequence	K	R	D	L	Y	N	I	E	K	W	W	L	A	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		T	T	T	T	G	G	G

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PDB structure

FASTA sequence

Hidden Markov model

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