PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1qd6C_

Fold library id	PDB Header	Molecule	Title
c1qd6C_	PDB header: membrane protein	Chain: C: PDB Molecule: protein (outer membrane phospholipase (ompla));	PDBTitle: outer membrane phospholipase a from escherichia coli

Links to external resources
Added to library: Tue Mar 16 13:41:38 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence F T L Y P Y D T N Y L I Y T Q T S D L N K E A I A S Y D W A E N A R K D E V K F Q L S L A F P L W R G I L G P N S V L G A S Y T Q K S W W Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S
T T T T T T S G G G G G
S T T T S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L S N S E E S S P F R E T N Y E P Q L F L G F A T D Y R F A G W T L R D V E M G Y N H D S N G R S D P T S R S W N R L Y T R L M A E N G N W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
G G G T
T T
T T S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L V E V K P W Y V V G N T D D N P D I T K Y M G Y Y Q L K I G Y H L G D A V L S A K G Q Y N W N T G Y G G A E L G L S Y P I T K H V R L Y T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T S T T
S T T
T T T
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240

Sequence Q V Y S G Y G E S L I D Y N F N Q T R V G V G V M L N D L F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S G G G T T
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	F	T	L	Y	P	Y	D	T	N	Y	L	I	Y	T	Q	T	S	D	L	N	K	E	A	I	A	S	Y	D	W	A	E	N	A	R	K	D	E	V	K	F	Q	L	S	L	A	F	P	L	W	R	G	I	L	G	P	N	S	V	L	G	A	S	Y	T	Q	K	S	W	W	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S										S	S			T	T	T	T	T	T	S	G	G	G	G	G			S																T	T	T	S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	S	N	S	E	E	S	S	P	F	R	E	T	N	Y	E	P	Q	L	F	L	G	F	A	T	D	Y	R	F	A	G	W	T	L	R	D	V	E	M	G	Y	N	H	D	S	N	G	R	S	D	P	T	S	R	S	W	N	R	L	Y	T	R	L	M	A	E	N	G	N	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		G	G	G	T																							T	T																			T	T	S																T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	V	E	V	K	P	W	Y	V	V	G	N	T	D	D	N	P	D	I	T	K	Y	M	G	Y	Y	Q	L	K	I	G	Y	H	L	G	D	A	V	L	S	A	K	G	Q	Y	N	W	N	T	G	Y	G	G	A	E	L	G	L	S	Y	P	I	T	K	H	V	R	L	Y	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S			T	T	S	T	T							S										T	T											T	T	T															T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence	Q	V	Y	S	G	Y	G	E	S	L	I	D	Y	N	F	N	Q	T	R	V	G	V	G	V	M	L	N	D	L	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S	G	G	G	T	T												S