PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3nb3C_

Fold library id	PDB Header	Molecule	Title
c3nb3C_	PDB header: virus	Chain: C: PDB Molecule: outer membrane protein a;	PDBTitle: the host outer membrane proteins ompa and ompc are packed at specific2 sites in the shigella phage sf6 virion as structural components

Links to external resources
Added to library: Sat Feb 19 08:39:35 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A P K D N T W Y T G A K L G W S Q H E N K L G A G A F G G Y Q V N P Y V G F E M G Y D W L G R M P Y A Y K A Q G V Q L T A K L G Y P I T D D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
S S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . .

Sequence L D I Y T R L G G M V W R A D T Y S N V Y G K N H D T G V S P V F A G G V E Y A I T P E I A T R L E Y Q W T N G M L S L G V S Y R F G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	P	K	D	N	T	W	Y	T	G	A	K	L	G	W	S	Q	H	E	N	K	L	G	A	G	A	F	G	G	Y	Q	V	N	P	Y	V	G	F	E	M	G	Y	D	W	L	G	R	M	P	Y	A	Y	K	A	Q	G	V	Q	L	T	A	K	L	G	Y	P	I	T	D	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T																													T	T																																S	S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Sequence	L	D	I	Y	T	R	L	G	G	M	V	W	R	A	D	T	Y	S	N	V	Y	G	K	N	H	D	T	G	V	S	P	V	F	A	G	G	V	E	Y	A	I	T	P	E	I	A	T	R	L	E	Y	Q	W	T	N	G	M	L	S	L	G	V	S	Y	R	F	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			S	S	S																						T	T