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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2o4vA_

Fold library idPDB HeaderMoleculeTitle
c2o4vA_PDB header: membrane proteinChain: A: PDB Molecule: porin p;PDBTitle: an arginine ladder in oprp mediates phosphate specific2 transfer across the outer membrane


Added to library: Tue Mar 16 13:30:50 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GTVTTDGADIVIKTKGGLEVATTDKEFSFKLGGRLQADYGRFDGYYTNNGNTADAAYFRRAYLEFGGTAY
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Known secondary structure (DSSP)




SSS

SSSTTSS
TTBSSSS
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence RDWKYQINYDLSRNVGNDSAGYFDEASVTYTGFNPVNLKFGRFYTDFGLEKATSSKWVTALERNLTYDIA
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Known secondary structure (DSSP) TTTT

SSBTTTB

TTTTS





S
TTT
SSSS

GGGGGS
 .........150.........160.........170.........180.........190.........200.........210
Sequence DWVNDNVGTGIQASSVVGGMAFLSGSVFSENNNDTDGDSVKRYNLRGVFAPLHEPGNVVHLGLQYAYRDL
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Known secondary structure (DSSP) GGGG

STTTBTTS
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence EDSAVDTRIRPRMGMRGVSTNGGNDAGSNGNRGLFGGSSAVEGLWKDDSVWGLEGAWALGAFSAQAEYLR
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Known secondary structure (DSSP) TTB




B


TT
GGGS
SSB


GGGB




B




TTSTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence RTVKAERDREDLKASGYYAQLAYTLTGEPRLYKLDGAKFDTIKPENKEIGAWELFYRYDSIKVEDDNIVV
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Known secondary structure (DSSP)
TT


TT




TTTT




S
TTT
TT

S
 .........360.........370.........380.........390.........400.........410.
Sequence DSATREVGDAKGKTHTLGVNWYANEAVKVSANYVKAKTDKISNANGDDSGDGLVMRLQYVF
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Known secondary structure (DSSP)

SSB
SS

SSSSB

TT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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