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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3jtyB_

Fold library idPDB HeaderMoleculeTitle
c3jtyB_PDB header: transport proteinChain: B: PDB Molecule: benf-like porin;PDBTitle: crystal structure of a benf-like porin from pseudomonas2 fluorescens pf-5


Added to library: Sat Aug 28 17:07:58 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GFLEDAQANLTLRNFYFNRNFTNPTKAQGKAEEWTQSFILDAKSGFTQGTVGFGMDVLGLYSLKLDGGKG
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Known secondary structure (DSSP)
TTTT


TTSS





SSS

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence TGGTQLLPLPADNFGRLGVAFKARLSQTEVKVGEWMPVLPILRSDDGRSLPQTFRGGQITSKEIAGLTLY
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Known secondary structure (DSSP) S

SSSS



STT

TT


SSSS



STT
 .........150.........160.........170.........180.........190.........200.........210
Sequence GGQFRANSPRDDSSMSDMSMFGKAAFTSDRFNFQGAEYAFNDKRTQIALWNAQLKDIYSQQFINLIHSQP
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Known secondary structure (DSSP)
TT
SS
B
TTS
TTTTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LGDWTLGANLGFFYGKEDGSARAGDMENRTWSGLFSAKYGGNTFYVGLQKLTGDSAWMRVNGTSGGTLAN
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Known secondary structure (DSSP)
SS

TT
TT


TTSS



BTT


TTSTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence DSYNASYDNAKEKSWQVRHDYNFAALGVPGLTLMNRYISGSNVHTATVSDGKEWGRESEVAYTVQSGTLK
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Known secondary structure (DSSP)

SS



STT
TTTTT
TTTT

SSSST
 .........360.........370.........380...
Sequence NLNLKWRNSTMRRDFSNNEFDENRLIISYPLSL
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Known secondary structure (DSSP) T
SS
S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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