PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2k0lA_

Fold library id	PDB Header	Molecule	Title
c2k0lA_	PDB header: membrane protein	Chain: A: PDB Molecule: outer membrane protein a;	PDBTitle: nmr structure of the transmembrane domain of the outer2 membrane protein a from klebsiella pneumoniae in dhpc3 micelles.

Links to external resources
Added to library: Tue Mar 16 12:37:36 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A R I M K A I F V L N A A P K D N T W Y A G G K L G W S Q Y H D T G F Y G N G F Q N N N G P T R N D Q L G A G A F G G Y Q V N P Y L G F E M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S S
S
S
S
S
S
S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G Y D W L G R M A Y K G S V D N G A F K A Q G V Q L T A K L G Y P I T D D L D I Y T R L G G M V W R A D S K G N Y A S T G V S R S E H D T G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S
S S S S
S
S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V S P V F A G G V E W A V T R D I A T R L E Y Q W V N N I G D A G T V G T R P D N G M L S L G V S Y R F G Q E D A A P V V A P A P A P A P E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
S S
S S
S
S S
S
S S S
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	R	I	M	K	A	I	F	V	L	N	A	A	P	K	D	N	T	W	Y	A	G	G	K	L	G	W	S	Q	Y	H	D	T	G	F	Y	G	N	G	F	Q	N	N	N	G	P	T	R	N	D	Q	L	G	A	G	A	F	G	G	Y	Q	V	N	P	Y	L	G	F	E	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S			S	S	S		S														S					S						S				S				S																	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	Y	D	W	L	G	R	M	A	Y	K	G	S	V	D	N	G	A	F	K	A	Q	G	V	Q	L	T	A	K	L	G	Y	P	I	T	D	D	L	D	I	Y	T	R	L	G	G	M	V	W	R	A	D	S	K	G	N	Y	A	S	T	G	V	S	R	S	E	H	D	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S	S				S	S															S	S	S	S																			S				S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	S	P	V	F	A	G	G	V	E	W	A	V	T	R	D	I	A	T	R	L	E	Y	Q	W	V	N	N	I	G	D	A	G	T	V	G	T	R	P	D	N	G	M	L	S	L	G	V	S	Y	R	F	G	Q	E	D	A	A	P	V	V	A	P	A	P	A	P	A	P	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S	S	S								S	S		S	S					S					S	S		S																					S	S	S				S