Fold library entry viewer: d1fepa_

Added to library: Tue Mar 16 12:41:17 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	D	T	I	V	V	T	A	A	E	Q	N	L	Q	A	P	G	V	S	T	I	T	A	D	E	I	R	K	N	P	V	A	R	D	V	S	K	I	I	R	T	X	P	G	V	N	L	T	G	N	S	T	S	G	Q	R	G	N	N	R	Q	I	D	I	R	G	X	G	P	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T	S	T	T												S			S	S		T					T	T	S	T	T						S		T	T		T	T	T	T							T	T	S		G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	T	L	I	L	I	D	G	K	P	V	S	S	R	N	S	V	R	Q	G	W	R	G	E	R	D	T	R	G	D	T	S	W	V	P	P	E	X	I	E	R	I	E	V	L	R	G	P	A	A	A	R	Y	G	N	G	A	A	G	G	V	V	N	I	I	T	K	K	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G						T	T					G	G	G	G	S				T	T	S				S			S	T	T	S	S		G	G	G									T					T	T		T	T		S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	E	W	H	G	S	W	D	A	Y	F	N	A	P	E	H	K	E	E	G	A	T	K	R	T	N	F	S	L	T	G	P	L	G	D	E	F	S	F	R	L	Y	G	N	L	D	K	T	Q	A	D	A	W	D	I	N	Q	G	H	Q	S	A	R	A	G	T	Y	A	T	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S													S	S	T	T	S															S	S	S																	T	T	T	T	T	T	T						G	G	G	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	P	A	G	R	E	G	V	I	N	K	D	I	N	G	V	V	R	W	D	F	A	P	L	Q	S	L	E	L	E	A	G	Y	S	R	Q	G	N	L	Y	A	G	D	T	Q	N	T	N	S	D	S	Y	T	R	S	K	Y	G	D	E	T	N	R	L	Y	R	Q	N	Y	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							T	T																			S					S	S								T	T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	T	W	N	G	G	W	D	N	G	V	T	T	S	N	W	V	Q	Y	E	H	T	R	N	S	R	I	P	E	G	L	A	G	Q	D	F	V	D	I	D	L	D	D	V	X	L	H	S	E	V	N	L	P	I	D	F	L	V	N	Q	T	L	T	L	G	T	E	W	N	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	S																				S																										S	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	Q	R	X	K	D	L	S	S	N	T	Q	A	D	R	S	P	Y	S	K	A	E	I	F	S	L	F	A	E	N	N	X	E	L	T	D	S	T	I	V	T	P	G	L	R	F	D	H	H	S	I	V	G	N	N	W	S	P	A	L	N	I	S	Q	G	L	G	D	D	F	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																		S	S	S													T	T	T															S	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	L	K	X	G	I	A	R	A	Y	K	A	P	S	L	Y	Q	T	N	P	N	Y	I	L	Y	S	K	G	Q	G	C	Y	L	Q	G	N	D	D	L	K	A	E	T	S	I	N	K	E	I	G	L	E	F	K	R	D	G	W	L	A	G	V	T	W	F	R	N	D	Y	R	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T	T	T		T	T						S										T	T																		T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	K	I	E	A	G	Y	V	A	V	G	Q	N	A	V	G	T	D	L	Y	Q	W	D	N	V	P	K	A	V	V	E	G	L	E	G	S	L	N	V	P	V	S	E	T	V	X	W	T	N	N	I	T	Y	X	L	K	S	E	N	K	T	T	G	D	R	L	S	I	I	P	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S		S		B		T	T	S		B																									T	T																T	T	T				S	S				S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	Y	T	L	N	S	T	L	S	W	Q	A	R	E	D	L	S	X	Q	T	T	F	T	W	Y	G	K	Q	Q	P	K	K	Y	N	Y	K	G	Q	P	A	V	G	P	E	T	K	E	I	S	P	Y	S	I	V	G	L	S	A	T	W	D	V	T	K	N	V	S	L	T	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T													B				S	B		T	T	S		B			G	G	G	G			B															S	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680
Sequence	V	D	N	L	F	D	K	R	L	W	R	A	G	N	A	Q	T	T	G	D	L	A	G	A	N	Y	I	A	G	A	G	A	Y	T	Y	N	E	P	G	R	T	W	Y	X	S	V	N	T	H	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	T	T				B				S		S	S					T	T	S	S	S						T	T					B

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PDB structure

FASTA sequence

Hidden Markov model

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