PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2iwvD_

Fold library id	PDB Header	Molecule	Title
c2iwvD_	PDB header: ion channel	Chain: D: PDB Molecule: outer membrane protein g;	PDBTitle: structure of the monomeric outer membrane porin ompg in the2 open and closed conformation

Links to external resources
Added to library: Tue Mar 16 12:25:30 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence N D W H F N I G A M Y E I E N V E G Y G E D M D G L A E P S V Y F N A A N G P W R I A L A Y Y Q E G P V D Y S A G K R G T W F D R P E L E V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S B T T B T
T T T T T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence H Y Q F L E N D D F S F G L T G G F R N Y G Y H Y V D E P G K D T A N M Q R W K I A P D W D V K L T D D L R F N G W L S M Y K F A N D L N T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S
T T
S S S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence T G Y A D T R V E T E T G L Q Y T F N E T V A L R V N Y Y L E R G F N M D D S R N N G E F S T Q E I R A Y L P L T L G N H S V T P Y T R I G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S S B
S S T T
T T
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . .

Sequence L D R W S N W D W Q D D I E R E G H D F N R V G L F Y G Y D F Q N G L S V S L E Y A F E W Q D H D E G D S D K F H Y A G V G V N Y S F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T T
S
S S S S S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	D	W	H	F	N	I	G	A	M	Y	E	I	E	N	V	E	G	Y	G	E	D	M	D	G	L	A	E	P	S	V	Y	F	N	A	A	N	G	P	W	R	I	A	L	A	Y	Y	Q	E	G	P	V	D	Y	S	A	G	K	R	G	T	W	F	D	R	P	E	L	E	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	S	S	S	B	T	T	B	T														T	T															T	T	T	T				S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	H	Y	Q	F	L	E	N	D	D	F	S	F	G	L	T	G	G	F	R	N	Y	G	Y	H	Y	V	D	E	P	G	K	D	T	A	N	M	Q	R	W	K	I	A	P	D	W	D	V	K	L	T	D	D	L	R	F	N	G	W	L	S	M	Y	K	F	A	N	D	L	N	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S																	S	S		T	T																				S	S	S														S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	G	Y	A	D	T	R	V	E	T	E	T	G	L	Q	Y	T	F	N	E	T	V	A	L	R	V	N	Y	Y	L	E	R	G	F	N	M	D	D	S	R	N	N	G	E	F	S	T	Q	E	I	R	A	Y	L	P	L	T	L	G	N	H	S	V	T	P	Y	T	R	I	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S														S	S	S	B														S	S	T	T			T	T																T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Sequence	L	D	R	W	S	N	W	D	W	Q	D	D	I	E	R	E	G	H	D	F	N	R	V	G	L	F	Y	G	Y	D	F	Q	N	G	L	S	V	S	L	E	Y	A	F	E	W	Q	D	H	D	E	G	D	S	D	K	F	H	Y	A	G	V	G	V	N	Y	S	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T	T	T			S																		S	S	S															S	S	S