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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: d1uqwa_

Fold library idFoldSuperfamilyFamily
d1uqwa_Periplasmic binding protein-like IIPeriplasmic binding protein-like IIPhosphate binding protein-like


Added to library: Tue Mar 16 12:43:54 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AAKDVVVAVGSNFTTLDPYDANDTLSQAVAKSFYQGLFGLDKEXKLKNVLAESYTVSDDGITYTVKLREG
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Known secondary structure (DSSP)


SS



S
GGG

STTT


S
TTS
SS
TTSS
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence IKFQDGTDFNAAAVKANLDRASDPANHLKRHNLYKNIAKTEAIDPTTVKITLKQPFSAFINILAHPATAX
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Known secondary structure (DSSP)
B
TTS
B

T
GGG

TTGGGTTTTTSS

TTTSTT


 .........150.........160.........170.........180.........190.........200.........210
Sequence ISPAALEKYGKEIGFYPVGTGPYELDTWNQTDFVKVKKFAGYWQPGLPKLDSITWRPVADNNTRAAXLQT
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Known secondary structure (DSSP)

GGGTTTS


SSSTTT
TT
SSTT



S


 .........220.........230.........240.........250.........260.........270.........280
Sequence GEAQFAFPIPYEQATLLEKNKNIELXASPSIXQRYISXNVTQKPFDNPKVREALNYAINRPALVKVAFAG
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Known secondary structure (DSSP) TS
S
S


TT
TTSTGGGS

TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence YATPATGVVPPSIAYAQSYKPWPYDPVKARELLKEAGYPNGFSTTLWSSHNHSTAQKVLQFTQQQLAQVG
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Known secondary structure (DSSP)

SSSS
TTSBT









T
TT


SSSTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence IKAQVTAXDAGQRAAEVEGKGQKESGVRXFYTGWSASTGEADWALSPLFASQNWPPTLFNTAFYSNKQVD
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Known secondary structure (DSSP)
TTS

TTT




TTSB
GGGTTTTS

TT



 .........430.........440.........450.........460.........470.........480.......
Sequence DFLAQALKTNDPAEKTRLYKAAQDIIWQESPWIPLVVEKLVSAHSKNLTGFWIXPDTGFSFEDADLQ
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Known secondary structure (DSSP) T




TTS

TTS

TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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