Email l.a.kelley@imperial.ac.uk Description P16095 Date Thu Jan 5 11:35:01 GMT 2012 Unique Job ID e368a897f2be2926

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2iafa1 100.0 43 Fold:FwdE/GAPDH domain-like Superfamily:Serine metabolism enzymes domain Family:Serine dehydratase beta chain-like 2 c1ygyA_ 99.6 17 PDB header:oxidoreductase Chain: A: PDB Molecule:d-3-phosphoglycerate dehydrogenase; PDBTitle: crystal structure of d-3-phosphoglycerate dehydrogenase from2 mycobacterium tuberculosis 3 d1ygya4 99.3 18 Fold:FwdE/GAPDH domain-like Superfamily:Serine metabolism enzymes domain Family:SerA intervening domain-like 4 d1szqa_ 97.6 17 Fold:2-methylcitrate dehydratase PrpD Superfamily:2-methylcitrate dehydratase PrpD Family:2-methylcitrate dehydratase PrpD 5 c2hp0A_ 97.6 15 PDB header:isomerase Chain: A: PDB Molecule:ids-epimerase; PDBTitle: crystal structure of iminodisuccinate epimerase 6 c3u4gA_ 51.7 38 PDB header:transferase Chain: A: PDB Molecule:namn:dmb phosphoribosyltransferase; PDBTitle: the structure of cobt from pyrococcus horikoshii 7 c3s1sA_ 51.3 31 PDB header:hydrolase, transferase Chain: A: PDB Molecule:restriction endonuclease bpusi; PDBTitle: characterization and crystal structure of the type iig restriction2 endonuclease bpusi 8 d2i7na2 31.7 21 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Fumble-like 9 c2rkbE_ 29.4 24 PDB header:lyase Chain: E: PDB Molecule:serine dehydratase-like; PDBTitle: serine dehydratase like-1 from human cancer cells 10 d1rypa_ 29.3 11 Fold:Ntn hydrolase-like Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases) Family:Proteasome subunits 11 d1no5a_ 26.0 22 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:Catalytic subunit of bi-partite nucleotidyltransferase 12 d1ug2a_ 24.5 19 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Myb/SANT domain 13 d1g5ta_ 24.4 20 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:RecA protein-like (ATPase-domain) 14 c1knyA_ 21.0 26 PDB header:transferase Chain: A: PDB Molecule:kanamycin nucleotidyltransferase; PDBTitle: kanamycin nucleotidyltransferase 15 c2kelB_ 20.7 26 PDB header:transcription repressor Chain: B: PDB Molecule:uncharacterized protein 56b; PDBTitle: structure of the transcription regulator svtr from the2 hyperthermophilic archaeal virus sirv1 16 d1g64b_ 19.4 19 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:RecA protein-like (ATPase-domain) 17 c3ugsB_ 19.2 20 PDB header:transferase Chain: B: PDB Molecule:undecaprenyl pyrophosphate synthase; PDBTitle: crystal structure of a probable undecaprenyl diphosphate synthase2 (upps) from campylobacter jejuni 18 c1yy3A_ 17.9 57 PDB header:isomerase Chain: A: PDB Molecule:s-adenosylmethionine:trna ribosyltransferase- PDBTitle: structure of s-adenosylmethionine:trna ribosyltransferase-2 isomerase (quea) 19 c2zfdB_ 16.4 22 PDB header:signaling protein/transferase Chain: B: PDB Molecule:putative uncharacterized protein t20l15_90; PDBTitle: the crystal structure of plant specific calcium binding protein atcbl22 in complex with the regulatory domain of atcipk14 20 d1pwha_ 15.4 13 Fold:Tryptophan synthase beta subunit-like PLP-dependent enzymes Superfamily:Tryptophan synthase beta subunit-like PLP-dependent enzymes Family:Tryptophan synthase beta subunit-like PLP-dependent enzymes 21 d1r85a_ not modelled 14.7 15 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:beta-glycanases 22 c2k9iB_ not modelled 13.9 25 PDB header:dna binding protein Chain: B: PDB Molecule:plasmid prn1, complete sequence; PDBTitle: nmr structure of plasmid copy control protein orf56 from2 sulfolobus islandicus 23 c2vfwB_ not modelled 13.9 16 PDB header:transferase Chain: B: PDB Molecule:short-chain z-isoprenyl diphosphate synthetase; PDBTitle: rv1086 native 24 d1gg2g_ not modelled 13.5 42 Fold:Non-globular all-alpha subunits of globular proteins Superfamily:Transducin (heterotrimeric G protein), gamma chain Family:Transducin (heterotrimeric G protein), gamma chain 25 d1ylqa1 not modelled 13.2 22 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:Catalytic subunit of bi-partite nucleotidyltransferase 26 d1omwg_ not modelled 12.2 42 Fold:Non-globular all-alpha subunits of globular proteins Superfamily:Transducin (heterotrimeric G protein), gamma chain Family:Transducin (heterotrimeric G protein), gamma chain 27 d1h72c1 not modelled 12.2 31 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:GHMP Kinase, N-terminal domain 28 c2cycB_ not modelled 12.0 20 PDB header:ligase Chain: B: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: crystal structure of tyrosyl-trna synthetase complexed with l-tyrosine2 from pyrococcus horikoshii 29 c1us2A_ not modelled 11.8 8 PDB header:hydrolase Chain: A: PDB Molecule:endo-beta-1,4-xylanase; PDBTitle: xylanase10c (mutant e385a) from cellvibrio japonicus in2 complex with xylopentaose 30 c3sz8D_ not modelled 11.8 10 PDB header:transferase Chain: D: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase 2; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 burkholderia pseudomallei 31 d1jb0l_ not modelled 11.8 26 Fold:Photosystem I reaction center subunit XI, PsaL Superfamily:Photosystem I reaction center subunit XI, PsaL Family:Photosystem I reaction center subunit XI, PsaL 32 c2rffA_ not modelled 11.8 21 PDB header:transferase Chain: A: PDB Molecule:putative nucleotidyltransferase; PDBTitle: crystal structure of a putative nucleotidyltransferase2 (np_343093.1) from sulfolobus solfataricus at 1.40 a3 resolution 33 c1u9pA_ not modelled 11.2 13 PDB header:unknown function Chain: A: PDB Molecule:parc; PDBTitle: permuted single-chain arc 34 d1j20a1 not modelled 11.1 24 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Adenine nucleotide alpha hydrolases-like Family:N-type ATP pyrophosphatases 35 c1k97A_ not modelled 11.0 10 PDB header:ligase Chain: A: PDB Molecule:argininosuccinate synthase; PDBTitle: crystal structure of e. coli argininosuccinate synthetase in complex2 with aspartate and citrulline 36 d1gotg_ not modelled 10.9 25 Fold:Non-globular all-alpha subunits of globular proteins Superfamily:Transducin (heterotrimeric G protein), gamma chain Family:Transducin (heterotrimeric G protein), gamma chain 37 c2ddhA_ not modelled 10.7 31 PDB header:oxidoreductase Chain: A: PDB Molecule:acyl-coa oxidase; PDBTitle: crystal structure of acyl-coa oxidase complexed with 3-oh-dodecanoate 38 d1xhmb1 not modelled 10.6 45 Fold:Non-globular all-alpha subunits of globular proteins Superfamily:Transducin (heterotrimeric G protein), gamma chain Family:Transducin (heterotrimeric G protein), gamma chain 39 d1fh9a_ not modelled 10.5 23 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:beta-glycanases 40 c1xhmB_ not modelled 10.5 45 PDB header:signaling protein Chain: B: PDB Molecule:guanine nucleotide-binding protein g(i)/g(s) PDBTitle: the crystal structure of a biologically active peptide2 (sigk) bound to a g protein beta:gamma heterodimer 41 d1knya2 not modelled 10.3 26 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:Kanamycin nucleotidyltransferase (KNTase), N-terminal domain 42 d1tbge_ not modelled 10.2 25 Fold:Non-globular all-alpha subunits of globular proteins Superfamily:Transducin (heterotrimeric G protein), gamma chain Family:Transducin (heterotrimeric G protein), gamma chain 43 c2fonA_ not modelled 10.1 25 PDB header:oxidoreductase Chain: A: PDB Molecule:peroxisomal acyl-coa oxidase 1a; PDBTitle: x-ray crystal structure of leacx1, an acyl-coa oxidase from2 lycopersicon esculentum (tomato) 44 c3lr6A_ not modelled 10.0 30 PDB header:structural protein Chain: A: PDB Molecule:major ampullate spidroin 1; PDBTitle: self-assembly of spider silk proteins is controlled by a ph-sensitive2 relay 45 c2dlcX_ not modelled 10.0 18 PDB header:ligase/trna Chain: X: PDB Molecule:tyrosyl-trna synthetase, cytoplasmic; PDBTitle: crystal structure of the ternary complex of yeast tyrosyl-trna2 synthetase 46 d1ncfb3 not modelled 9.9 40 Fold:TNF receptor-like Superfamily:TNF receptor-like Family:TNF receptor-like 47 d1b65a_ not modelled 9.8 20 Fold:DmpA/ArgJ-like Superfamily:DmpA/ArgJ-like Family:DmpA-like 48 d1ng7a_ not modelled 9.7 36 Fold:Soluble domain of poliovirus core protein 3a Superfamily:Soluble domain of poliovirus core protein 3a Family:Soluble domain of poliovirus core protein 3a 49 d1k61a_ not modelled 9.6 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 50 d1ee8a1 not modelled 9.2 14 Fold:S13-like H2TH domain Superfamily:S13-like H2TH domain Family:Middle domain of MutM-like DNA repair proteins 51 c1kh2D_ not modelled 9.1 25 PDB header:ligase Chain: D: PDB Molecule:argininosuccinate synthetase; PDBTitle: crystal structure of thermus thermophilus hb82 argininosuccinate synthetase in complex with atp 52 c3bh1A_ not modelled 9.1 28 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0371 protein dip2346; PDBTitle: crystal structure of protein dip2346 from corynebacterium diphtheriae 53 c2crnA_ not modelled 9.0 16 PDB header:immune system Chain: A: PDB Molecule:ubash3a protein; PDBTitle: solution structure of the uba domain of human ubash3a2 protein 54 c2k3qA_ not modelled 9.0 22 PDB header:structural protein Chain: A: PDB Molecule:tusp1; PDBTitle: solution structure of the n-terminal domain (tusp1-n) of the2 egg case silk from nephila antipodiana 55 d1nlna_ not modelled 8.8 19 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Adenain-like 56 d1tuxa_ not modelled 8.6 18 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:beta-glycanases 57 d1fi6a_ not modelled 8.3 20 Fold:EF Hand-like Superfamily:EF-hand Family:Eps15 homology domain (EH domain) 58 c1iszA_ not modelled 8.1 13 PDB header:hydrolase Chain: A: PDB Molecule:endo-1,4-beta-d-xylanase; PDBTitle: crystal structure of xylanase from streptomyces2 olivaceoviridis e-86 complexed with galactose 59 d1wota_ not modelled 8.0 29 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:Catalytic subunit of bi-partite nucleotidyltransferase 60 c2f5xC_ not modelled 8.0 27 PDB header:transport protein Chain: C: PDB Molecule:bugd; PDBTitle: structure of periplasmic binding protein bugd 61 d2nrha1 not modelled 7.9 13 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:CoaX-like 62 c2x3dC_ not modelled 7.8 16 PDB header:unknown function Chain: C: PDB Molecule:sso6206; PDBTitle: crystal structure of sso6206 from sulfolobus solfataricus p2 63 d2raqa1 not modelled 7.7 11 Fold:Ferredoxin-like Superfamily:MTH889-like Family:MTH889-like 64 d1bg4a_ not modelled 7.7 18 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:beta-glycanases 65 d1k92a1 not modelled 7.7 11 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Adenine nucleotide alpha hydrolases-like Family:N-type ATP pyrophosphatases 66 d1p5ja_ not modelled 7.7 13 Fold:Tryptophan synthase beta subunit-like PLP-dependent enzymes Superfamily:Tryptophan synthase beta subunit-like PLP-dependent enzymes Family:Tryptophan synthase beta subunit-like PLP-dependent enzymes 67 c1p5jA_ not modelled 7.7 13 PDB header:lyase Chain: A: PDB Molecule:l-serine dehydratase; PDBTitle: crystal structure analysis of human serine dehydratase 68 c2fglA_ not modelled 7.7 13 PDB header:hydrolase Chain: A: PDB Molecule:alkaline thermostable endoxylanase; PDBTitle: an alkali thermostable f/10 xylanase from alkalophilic2 bacillus sp. ng-27 69 d1j6ua3 not modelled 7.6 29 Fold:Ribokinase-like Superfamily:MurD-like peptide ligases, catalytic domain Family:MurCDEF 70 d1wkva1 not modelled 7.5 18 Fold:Tryptophan synthase beta subunit-like PLP-dependent enzymes Superfamily:Tryptophan synthase beta subunit-like PLP-dependent enzymes Family:Tryptophan synthase beta subunit-like PLP-dependent enzymes 71 d1k47a1 not modelled 7.4 25 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:GHMP Kinase, N-terminal domain 72 d1x2na1 not modelled 7.3 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 73 d2gkea2 not modelled 7.3 23 Fold:Diaminopimelate epimerase-like Superfamily:Diaminopimelate epimerase-like Family:Diaminopimelate epimerase 74 c2xa0A_ not modelled 7.3 29 PDB header:apoptosis Chain: A: PDB Molecule:apoptosis regulator bcl-2; PDBTitle: crystal structure of bcl-2 in complex with a bax bh32 peptide 75 d2ar0a1 not modelled 7.2 19 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:N-6 DNA Methylase-like 76 d1j09a1 not modelled 7.2 25 Fold:An anticodon-binding domain of class I aminoacyl-tRNA synthetases Superfamily:An anticodon-binding domain of class I aminoacyl-tRNA synthetases Family:C-terminal domain of glutamyl-tRNA synthetase (GluRS) 77 d1vl2a1 not modelled 7.1 31 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Adenine nucleotide alpha hydrolases-like Family:N-type ATP pyrophosphatases 78 c1w07A_ not modelled 7.0 31 PDB header:oxidoreductase Chain: A: PDB Molecule:acyl-coa oxidase; PDBTitle: arabidopsis thaliana acyl-coa oxidase 1 79 c3g2bA_ not modelled 7.0 15 PDB header:biosynthetic protein Chain: A: PDB Molecule:coenzyme pqq synthesis protein d; PDBTitle: crystal structure of pqqd from xanthomonas campestris 80 d1vlfm2 not modelled 6.9 16 Fold:Formate dehydrogenase/DMSO reductase, domains 1-3 Superfamily:Formate dehydrogenase/DMSO reductase, domains 1-3 Family:Formate dehydrogenase/DMSO reductase, domains 1-3 81 d1exta3 not modelled 6.9 40 Fold:TNF receptor-like Superfamily:TNF receptor-like Family:TNF receptor-like 82 d2r5yb1 not modelled 6.9 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 83 c2jyaA_ not modelled 6.9 25 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein atu1810; PDBTitle: nmr solution structure of protein atu1810 from agrobacterium2 tumefaciens. northeast structural genomics consortium target atr23,3 ontario centre for structural proteomics target atc1776 84 c3ibqA_ not modelled 6.7 24 PDB header:transferase Chain: A: PDB Molecule:pyridoxal kinase; PDBTitle: crystal structure of pyridoxal kinase from lactobacillus2 plantarum in complex with atp 85 d1uf2a_ not modelled 6.7 36 Fold:Reovirus inner layer core protein p3 Superfamily:Reovirus inner layer core protein p3 Family:Phytoreovirus core 86 c1uf2A_ not modelled 6.7 36 PDB header:virus Chain: A: PDB Molecule:core protein p3; PDBTitle: the atomic structure of rice dwarf virus (rdv) 87 d1yrnb_ not modelled 6.7 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 88 c2fkkA_ not modelled 6.6 25 PDB header:viral protein Chain: A: PDB Molecule:baseplate structural protein gp10; PDBTitle: crystal structure of the c-terminal domain of the bacteriophage t42 gene product 10 89 c2j5bA_ not modelled 6.5 15 PDB header:ligase Chain: A: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: structure of the tyrosyl trna synthetase from acanthamoeba2 polyphaga mimivirus complexed with tyrosynol 90 c1qoyA_ not modelled 6.5 12 PDB header:toxin Chain: A: PDB Molecule:hemolysin e; PDBTitle: e.coli hemolysin e (hlye, clya, shea) 91 c1pprO_ not modelled 6.5 11 PDB header:light-harvesting protein Chain: O: PDB Molecule:peridinin-chlorophyll protein; PDBTitle: peridinin-chlorophyll-protein of amphidinium carterae 92 c2jugB_ not modelled 6.5 39 PDB header:biosynthetic protein Chain: B: PDB Molecule:tubc protein; PDBTitle: multienzyme docking in hybrid megasynthetases 93 d1us3a2 not modelled 6.4 8 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:beta-glycanases 94 c2gefA_ not modelled 6.4 50 PDB header:hydrolase Chain: A: PDB Molecule:protease vp4; PDBTitle: crystal structure of a novel viral protease with a2 serine/lysine catalytic dyad mechanism 95 d1p3da3 not modelled 6.4 26 Fold:Ribokinase-like Superfamily:MurD-like peptide ligases, catalytic domain Family:MurCDEF 96 c3l0zC_ not modelled 6.4 19 PDB header:transferase Chain: C: PDB Molecule:putative nicotinate-nucleotide-dimethylbenzimidazole PDBTitle: crystal structure of a putative nicotinate-nucleotide-2 dimethylbenzimidazole phosphoribosyltransferase from3 methanocaldococcus jannaschii dsm 2661 97 c2ci8A_ not modelled 6.3 9 PDB header:translation Chain: A: PDB Molecule:cytoplasmic protein nck1; PDBTitle: sh2 domain of human nck1 adaptor protein - uncomplexed 98 c3khkA_ not modelled 6.3 23 PDB header:dna binding protein Chain: A: PDB Molecule:type i restriction-modification system PDBTitle: crystal structure of type-i restriction-modification system2 methylation subunit (mm_0429) from methanosarchina mazei. 99 c2dagA_ not modelled 6.3 13 PDB header:hydrolase Chain: A: PDB Molecule:ubiquitin carboxyl-terminal hydrolase 5; PDBTitle: solution structure of the first uba domain in the human2 ubiquitin specific protease 5 (isopeptidase 5)