Fold library entry viewer: c3s1sA_

Added to library: Sat Jul 16 09:35:00 2011
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	N	N	C	V	F	S	Y	L	P	S	Y	G	D	D	E	V	S	V	Y	H	P	I	C	E	A	A	L	N	Q	A	L	V	N	T	G	L	D	S	T	Y	E	V	V	H	H	E	L	V	G	S	I	E	A	D	F	V	I	K	N	K	Q	T	K	K	Y	L	L	I	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S					T	T	S																						T	G	G	G	T										T	T										T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	V	K	R	T	K	S	Q	V	S	S	T	R	Y	R	L	Q	A	Q	S	Y	V	R	E	A	N	I	K	V	E	Q	H	Y	Y	C	L	T	N	L	E	I	I	D	F	F	K	H	D	P	N	K	P	V	V	S	Q	Q	I	I	E	P	S	P	I	V	V	G	N	F	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S					T																G	G	G											S	S									T	T	S			G	G	G		B	B	T	T		S						T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	T	V	S	E	F	Y	N	R	L	V	E	A	F	Q	N	I	I	D	I	S	V	N	D	A	G	T	Y	K	S	S	T	A	N	L	V	D	I	L	E	N	R	K	D	N	S	T	S	W	H	Q	A	L	V	V	A	G	Y	E	Y	I	R	G	V	L	R	G	Q	N	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																						T	T				B													T	T	T	T																							T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	V	P	T	R	D	A	I	Y	F	K	S	R	P	G	R	L	L	E	E	G	R	K	I	D	F	N	V	L	F	S	E	P	E	P	N	T	N	D	N	D	I	W	N	V	N	L	L	S	S	L	N	D	L	G	R	R	I	L	T	G	D	E	L	A	E	L	I	H	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S		G	G	G	G	S	S											T	T	S		T	T	T	S		S	S				T	T		T	T	T																		S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	I	A	T	R	G	R	G	H	E	G	V	V	P	T	D	I	E	L	G	K	V	L	S	I	I	S	Q	H	I	L	G	R	P	L	T	E	D	E	V	I	S	D	P	A	A	G	S	G	N	L	L	A	T	V	S	A	G	F	N	N	V	X	P	R	Q	I	W	A	N	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S					B	S	S	S																			S				T	T						T	T		T	T	S									T	S	T	T			G	G	G
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	I	E	T	L	F	L	E	L	L	S	I	R	L	G	L	L	F	P	Q	L	V	S	S	N	N	A	P	T	I	T	G	E	D	V	C	S	L	N	P	E	D	F	A	N	V	S	V	V	V	X	N	P	P	Y	V	S	G	V	T	D	P	A	I	K	R	K	F	A	H	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		G	G	G										T	T	S	T	T	T		B	T	T	B									G	G	G			G	G	G	G	T	T									B			S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	I	I	Q	L	T	G	N	R	P	Q	T	L	F	G	Q	I	G	V	E	A	L	F	L	E	L	V	T	E	L	V	Q	D	G	T	V	I	S	A	I	X	P	K	Q	Y	L	T	A	Q	G	N	E	S	K	A	F	R	E	F	L	V	G	N	F	G	L	E	H	I	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S			S	S		S	S	S															S		T	T									T							S											T	T	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	Y	P	R	E	G	L	F	E	E	V	I	K	D	T	V	V	F	V	G	R	K	G	S	S	V	E	E	I	E	V	L	D	S	F	T	P	L	E	Q	V	D	L	H	N	L	K	R	A	L	S	N	S	S	N	E	Q	I	I	Q	P	X	G	X	E	L	R	K	E	K	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B			S	S		S		B										T	T				S									S		G	G	G															S	S						T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	E	E	L	E	N	R	V	T	V	G	W	R	H	I	T	S	N	G	R	V	A	E	E	W	I	T	N	N	L	E	S	H	C	I	R	L	V	A	S	D	Y	D	L	R	R	G	R	V	G	N	K	G	A	S	D	L	L	F	I	N	S	K	K	K	L	W	D	L	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T	T		S	G	G	G		S													T	G	G	G				T	T	T	S	S								B	T		S	S						T	T	T	S	S								G
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	E	S	V	P	R	D	W	L	Y	P	A	L	R	K	V	N	E	I	N	T	P	I	F	N	E	D	A	T	P	V	R	F	L	C	P	P	N	S	A	Y	Q	D	G	T	G	E	S	I	I	L	D	K	I	L	D	V	Y	V	D	F	Q	V	Y	K	S	K	Q	K	K	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	S		G	G	G						S	S	G	G	G			S	S			S	T	T	T		S								G	G	G	S	S	S	S	S																					S	T	T	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	E	K	S	K	E	E	L	K	E	I	L	Y	K	E	S	D	F	Y	S	S	E	H	T	V	F	I	P	R	A	L	R	R	S	A	R	A	F	I	N	E	Q	K	V	F	C	S	T	N	A	L	E	V	F	G	G	N	S	E	E	X	W	L	L	L	S	W	L	S	S	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T		B		T	T						S			S	S	B							S	S		B			B	T	T						S	S													T	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	F	A	Q	L	Q	F	E	A	X	A	K	D	Q	E	G	E	R	K	L	E	K	K	S	I	Q	N	L	Y	I	P	N	L	G	D	I	D	D	V	L	K	Q	D	L	I	E	E	V	R	E	I	H	F	F	D	L	C	R	P	R	V	R	K	L	D	L	L	W	A	K	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	T			S	S									T	T						G	G	G	S													T	T					B	T	T	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870
Sequence	F	W	S	G	N	E	X	S	K	T	K	E	A	A	E	L	L	E	D	L	V	F	E	R	Y	P	E	G	S	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S																						G	G	G

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PDB structure

FASTA sequence

Hidden Markov model

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