Fold library entry viewer: d1uf2a_

Added to library: Tue Mar 16 14:04:21 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	S	V	V	S	R	T	P	I	P	L	S	K	I	G	L	Q	D	V	K	K	L	F	D	I	N	V	I	K	C	G	S	S	L	R	I	V	D	E	P	Q	V	T	F	I	V	S	Y	A	K	D	I	Y	D	K	F	M	C	I	E	H	D	S	A	Y	E	P	S	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S		S	S							G	G	G	S														S	S	S			S	S											S		T	T						T	T	S		T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	M	H	R	V	R	V	I	Y	S	M	L	N	D	Y	C	A	K	M	I	S	E	V	P	Y	E	S	S	F	V	G	E	L	P	V	K	S	V	T	L	N	K	L	G	D	R	N	M	D	A	L	A	E	H	L	L	F	E	H	D	V	V	N	A	Q	R	E	N	R	I	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T	T														T	T								G	G	G	S	G	G	G							T	T	S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	Q	R	K	S	A	P	A	V	P	V	I	F	G	D	D	L	E	P	A	V	R	E	R	A	N	L	Y	H	R	Y	S	V	P	Y	H	Q	I	E	L	A	L	H	A	L	A	N	D	L	L	S	I	Q	Y	C	H	P	T	V	V	Y	N	Y	L	S	S	R	A	P	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S						S	S		S	S								T	T	T	S			G	G	G							S	S																																T			T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	F	L	R	L	D	D	Q	V	S	L	K	L	T	S	A	G	I	G	T	L	M	P	R	P	V	V	Q	L	L	D	Y	D	L	V	Y	M	S	P	L	A	L	N	N	L	A	S	R	L	L	R	K	I	S	L	H	L	V	M	Q	M	V	T	A	V	Q	Q	D	L	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T													S			T	T													G	G	G	G	G	G																						B
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	V	S	V	S	S	N	V	T	N	P	A	S	A	C	L	V	R	M	N	V	Q	G	V	Q	T	L	A	V	F	I	A	Q	S	M	L	N	P	N	I	S	Y	G	M	I	S	G	L	T	L	D	C	F	S	N	F	I	Y	G	A	C	L	M	L	F	Q	A	L	I	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T			T	T									T	T	S																T	T	T		T	T	T						S				T	T	G	G	G	S											T	T	T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	P	S	A	L	T	A	R	Q	R	L	D	I	N	N	R	F	A	Y	F	L	I	K	C	H	A	T	Q	A	T	T	A	R	L	V	A	N	Q	V	I	Y	P	V	D	A	I	D	Q	W	Q	S	N	G	R	D	V	L	V	A	I	Y	N	N	L	L	P	G	E	L	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	B																				T	S											T	T	S	S			T	T		T	T	T	S	S			S										T			T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	T	N	L	I	Q	T	Y	F	R	G	N	T	A	Q	Q	A	A	E	I	L	I	P	A	D	Q	T	S	Y	G	A	N	E	T	R	A	L	S	A	P	Y	L	F	G	A	P	I	N	M	L	A	P	D	A	R	L	S	T	Y	K	R	D	L	A	L	P	D	R	S	P	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T							T						G	G	G	S	T	T						G	G	G	T	T	T	S	T	T				G	G	G			B		G	G	G								T			S				B
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	L	I	T	T	V	E	G	Q	N	S	I	S	I	E	N	L	R	H	K	T	G	L	I	R	A	M	Y	L	N	G	F	V	T	Q	P	P	A	W	I	R	N	A	N	S	N	T	A	L	L	S	R	F	L	D	A	T	P	N	L	L	G	I	Y	E	A	I	L	A	N	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S				T	T	T																	T	T	S	S			S	S			T																				G	G	G	G									T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	Y	A	N	A	V	N	V	Y	C	D	S	V	Y	R	A	D	I	P	I	E	W	K	L	H	Q	S	V	D	P	Q	D	L	L	F	G	V	F	G	I	V	P	Q	Y	Q	I	L	N	E	A	V	P	D	F	F	A	G	G	E	D	I	L	I	L	Q	L	I	R	A	V	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	B	S	S							T	T	S		G	G	G	S							G	G	G								B				S	S									B	T	T	T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	D	T	L	S	N	K	L	G	R	N	P	A	D	I	F	H	L	E	E	V	F	K	V	I	E	E	I	V	S	V	L	V	Q	Q	K	I	D	V	R	K	Y	F	T	E	S	M	R	S	G	S	F	S	K	P	R	W	D	N	F	L	R	R	P	V	A	Q	R	L	P	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S						S																		T	S								T	B	S	S	S	S				B											S				S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	L	Y	S	V	I	M	T	Q	A	D	H	V	Y	N	Y	M	T	Q	L	T	H	I	I	P	I	T	D	C	F	Y	I	V	K	N	S	G	F	V	D	R	G	S	T	G	P	V	I	A	S	S	S	V	Y	E	N	V	L	K	V	V	H	T	I	A	D	F	D	A	A	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			G	G	G	G	S	S			S						S							T	T			S	S					S	S			G	G	G									S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	A	L	R	L	Q	R	R	R	V	D	N	T	S	Y	T	D	S	L	S	D	M	F	N	G	L	R	S	I	S	S	S	E	F	V	R	S	V	N	G	R	S	V	F	T	E	G	R	I	D	A	I	K	V	N	M	R	A	K	F	D	L	Q	F	I	T	E	E	G	G	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T						S	S	S												T	S													T	T						S																							S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	S	K	P	P	N	V	K	K	L	M	F	S	D	F	L	S	F	L	D	S	H	K	S	D	Y	R	P	P	L	L	T	V	P	I	T	I	G	L	N	N	L	G	E	T	N	S	N	T	L	R	M	R	S	E	A	I	D	E	Y	F	S	S	Y	V	G	A	Q	I	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S																			S	T	T		S	S															T	T	S								S										G	G	G				S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.
Sequence	P	I	N	V	V	D	T	R	V	Y	T	E	F	S	E	L	R	N	F	F	T	G	D	V	V	I	R	D	D	P	F	D	V	W	D	G	V	K	A	T	Y	I	P	I	G	V	H	G	V	R	L	D	P	N	G	D	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G							S	S								S								S	S																S	S

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PDB structure

FASTA sequence

Hidden Markov model

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