Fold library entry viewer: c1w07A_

Added to library: Tue Mar 16 12:10:54 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	G	I	D	H	L	A	D	E	R	N	K	A	E	F	D	V	E	D	M	K	I	V	W	A	G	S	R	H	A	F	E	V	S	D	R	I	A	R	L	V	A	S	D	P	V	F	E	K	S	N	R	A	R	L	S	R	K	E	L	F	K	S	T	L	R	K	C	A	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T					T	T		S	S											S	S																T		G	G	G			T	T	T	T	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	F	K	R	I	I	E	L	R	L	N	E	E	E	A	G	R	L	R	H	F	I	D	Q	P	A	Y	V	D	L	H	W	G	M	F	V	P	A	I	K	G	Q	G	T	E	E	Q	Q	K	K	W	L	S	L	A	N	K	M	Q	I	I	G	C	Y	A	Q	T	E	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T																									T									S														T	T	S	S								B	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	H	G	S	N	V	Q	G	L	E	T	T	A	T	L	D	P	K	T	D	E	F	V	I	H	T	P	T	Q	T	A	S	K	W	W	P	G	G	L	G	K	V	S	T	H	A	V	V	Y	A	R	L	I	T	N	G	K	D	Y	G	I	H	G	F	I	V	Q	L	R	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B	S	S		G	G	G									T	T	T	T								S	G	G	G	S					T	T	T	T	T	T		S											T	T													B		T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	D	H	S	P	L	P	N	I	T	V	G	D	I	G	T	K	M	G	N	G	A	Y	N	S	M	D	N	G	F	L	M	F	D	H	V	R	I	P	R	D	Q	M	L	M	R	L	S	K	V	T	R	E	G	E	Y	V	P	S	D	V	P	K	Q	L	V	Y	G	T	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T			B		T	T										S	S	S	S	G	G	G	G	S								S	S					G	G	G	B			S	S					T	T							S	S		G	G	G		T	T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	Y	V	R	Q	T	I	V	A	D	A	S	N	A	L	S	R	A	V	C	I	A	T	R	Y	S	A	V	R	R	Q	F	G	A	G	I	E	T	Q	V	I	D	Y	K	T	Q	Q	N	R	L	F	P	L	L	A	S	A	Y	A	F	R	F	V	G	E	W	L	K	W	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T																													B		S							B	G	G	G	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	Y	T	D	V	T	E	R	L	A	A	S	D	F	A	T	L	P	E	A	H	A	C	T	A	G	L	K	S	L	T	T	T	A	T	A	D	G	I	E	E	C	R	K	L	C	G	G	H	G	Y	L	W	C	S	G	L	P	E	L	F	A	V	Y	V	P	A	C	T	Y	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T	T			T	T																													T	T	G	G	G	G	G	S	G	G	G	S									G	G	G	G	T	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	D	N	V	V	L	Q	L	Q	V	A	R	F	L	M	K	T	V	A	Q	L	G	S	G	K	V	P	V	G	T	T	A	Y	M	G	R	A	A	H	L	L	Q	C	R	S	G	V	Q	K	A	E	D	W	L	N	P	D	V	V	L	E	A	F	E	A	R	A	L	R	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																		T	T	T	T	T	S					G	G	G	G	G	G	G	G					T	S							S	G	G	G	G	G
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	V	T	C	A	K	N	L	S	K	F	E	N	Q	E	Q	G	F	Q	E	L	L	A	D	L	V	E	A	A	I	A	H	C	Q	L	I	V	V	S	K	F	I	A	K	L	E	Q	D	I	G	G	K	G	V	K	K	Q	L	N	N	L	C	Y	I	Y	A	L	Y	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	S	S	S								T																								T	T	S				S	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	H	K	H	L	G	D	F	L	S	T	N	C	I	T	P	K	Q	A	S	L	A	N	D	Q	L	R	S	L	Y	T	Q	V	R	P	N	A	V	A	L	V	D	A	F	N	Y	T	D	H	Y	L	N	S	V	L	G	R	Y	D	G	N	V	Y	P	K	L	F	E	E	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T							T	T	S	S																				G	G	G							T	T								T		S	T	T		T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.
Sequence	K	D	P	L	N	D	S	V	V	P	D	G	Y	Q	E	Y	L	R	P	V	L	Q	Q	Q	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	G	G	G	G		S	S		T	T					T					T	T

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PDB structure

FASTA sequence

Hidden Markov model

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