Fold library entry viewer: d1vlfm2

Added to library: Tue Mar 16 12:40:21 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	G	E	V	V	R	L	T	N	S	S	T	G	G	P	V	F	V	Y	V	K	D	G	K	I	I	R	M	T	P	M	D	F	D	D	A	V	D	A	P	S	W	K	I	E	A	R	G	K	T	F	T	P	P	R	K	T	S	I	A	P	Y	T	A	G	F	K	S	M	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T									T	T									B			T	T	T	S									T	T							S	B									T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	S	D	L	R	I	P	Y	P	M	K	R	K	S	F	D	P	N	G	E	R	N	P	Q	L	R	G	A	G	L	S	K	Q	D	P	W	S	D	Y	E	R	I	S	W	D	E	A	T	D	I	V	V	A	E	I	N	R	I	K	H	A	Y	G	P	S	A	I	L	S	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T		T	T	B			S					T	T			T	T	S				G	G	G	T	T					T	T		G	G	G	G																								T		G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	S	S	H	H	M	W	G	N	V	G	Y	R	H	S	T	Y	F	R	F	M	N	M	M	G	F	T	Y	A	D	H	N	P	D	S	W	E	G	W	H	W	G	G	M	H	M	W	G	F	S	W	R	L	G	N	P	E	Q	Y	D	L	L	E	D	G	L	K	H	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S				S		T	T	T	S	T	T	T																			T	T	T						T								G	G	G	T	T					T	T										S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	M	I	V	F	W	S	S	D	P	E	T	N	S	G	I	Y	A	G	F	E	S	N	I	R	R	Q	W	L	K	D	L	G	V	D	F	V	F	I	D	P	H	M	N	H	T	A	R	L	V	A	D	K	W	F	S	P	K	I	G	T	D	H	A	L	S	F	A	I	A	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S								S	S	S		T	T	T	T										T	T								S	S										S							T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	T	W	L	K	E	D	S	Y	D	K	E	Y	V	A	A	N	A	H	G	F	E	E	W	A	D	Y	V	L	G	K	T	D	G	T	P	K	T	C	E	W	A	E	E	E	S	G	V	P	A	C	E	I	R	A	L	A	R	Q	W	A	K	K	N	T	Y	L	A	A	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T		S											S									T	T	T	T	T	S																													S							T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	G	G	W	G	G	A	C	R	A	S	H	G	I	E	W	A	R	G	M	I	A	L	A	T	M	Q	G	M	G	K	P	G	S	N	M	W	S	T	T	Q	G	V	P	L	D	Y	E	F	Y	F	P	G	Y	A	E	G	G	I	S	G	D	C	E	N	S	A	A	G	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S			G	G	G	S	S	T	T															T	T	T	T	S	T	T						S	S	S						T	T	S					G	G	G		T	T	S			T	T	T	S	G	G	G	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	K	F	A	W	R	M	F	D	G	K	T	T	F	P	S	P	S	N	L	N	T	S	A	G	Q	H	I	P	R	L	K	I	P	E	C	I	M	G	G	K	F	Q	W	S	G	K	G	F	A	G	G	D	I	S	H	Q	L	H	Q	Y	E	Y	P	A	P	G	Y	S	K	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T								S	S	S							S	S	S	S	T	T	S					G	G	G								S								S	S			S	S	T	T	G	G	G						S		T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	K	M	F	W	K	Y	G	G	P	H	L	G	T	M	T	A	T	N	R	Y	A	K	M	Y	T	H	D	S	L	E	F	V	V	S	Q	S	I	W	F	E	G	E	V	P	F	A	D	I	I	L	P	A	C	T	N	F	E	R	W	D	I	S	E	F	A	N	C	S	G	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S							S	S	S	T							T	T		T	T									S	B	S		T	T	G	G	G		S					B			G	G	G	S						T	T			B	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	I	P	D	N	Y	Q	L	C	N	H	R	V	I	S	L	Q	A	K	C	I	E	P	V	G	E	S	M	S	D	Y	E	I	Y	R	L	F	A	K	K	L	N	I	E	E	M	F	S	E	G	K	D	E	L	A	W	C	E	Q	Y	F	N	A	T	D	M	P	K	Y	M	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B	T	T	G	G	G	G	S	S	S										S			S	T	T		B													T	T							T	T													T	S	S	G	G	G	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	W	D	E	F	F	K	K	G	Y	F	V	V	P	D	N	P	N	R	K	K	T	V	A	L	R	W	F	A	E	G	R	E	K	D	T	P	D	W	G	P	R	L	N	N	Q	V	C	R	K	G	L	Q	T	T	T	G	K	V	E	F	I	A	T	S	L	K	N	F	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T	S					T	T					T	T	S				S	S		S		S		G	G	G	S	B	T	T	B	S		S	S	T	T	S	S			S	B
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.
Sequence	Q	G	Y	I	D	E	H	R	P	S	M	H	T	Y	V	P	A	W	E	S	Q	K	H	S	P	L	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T				T	T	S		S	B							T	T	S	T	T	T		G	G	G

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PDB structure

FASTA sequence

Hidden Markov model

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