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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c1pprO_

Fold library idPDB HeaderMoleculeTitle
c1pprO_PDB header: light-harvesting proteinChain: O: PDB Molecule: peridinin-chlorophyll protein;PDBTitle: peridinin-chlorophyll-protein of amphidinium carterae


Added to library: Tue Mar 16 12:34:59 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DEIGDAAKKLGDASYAFAKEVDWNNGIFLQAPGKLQPLEALKAIDKMIVMGAAADPKLLKAAAEAHHKAI
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Known secondary structure (DSSP)
S
TT
GGGGS
SSS

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence GSISGPNGVTSRADWDNVNAALGRVIASVPENMVMDVYDSVSKITDPKVPAYMKSLVNGADAEKAYEGFL
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Known secondary structure (DSSP) T
BTTTTB

TS
S
TTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence AFKDVVKKSQVTSAAGPATVPSGDKIGVAAQQLSEASYPFLKEIDWLSDVYMKPLPGVSAQQSLKAIDKM
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Known secondary structure (DSSP)

SS








S
S
TT
SGGGS

TT

 .........220.........230.........240.........250.........260.........270.........280
Sequence IVMGAQADGNALKAAAEAHHKAIGSIDATGVTSAADYAAVNAALGRVIASVPKSTVMDVYNAMAGVTDTS
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Known secondary structure (DSSP) S
T

TTS


TTS


T
 .........290.........300.........310..
Sequence IPLNMFSKVNPLDANAAAKAFYTFKDVVQAAQ
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Known secondary structure (DSSP) TTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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