Email l.a.kelley@imperial.ac.uk Description P60472 Date Thu Jan 5 12:06:50 GMT 2012 Unique Job ID 9d691c5baa51da38

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2vg2C_ 100.0 41 PDB header:transferase Chain: C: PDB Molecule:undecaprenyl pyrophosphate synthetase; PDBTitle: rv2361 with ipp 2 d1ueha_ 100.0 97 Fold:Undecaprenyl diphosphate synthase Superfamily:Undecaprenyl diphosphate synthase Family:Undecaprenyl diphosphate synthase 3 c2vfwB_ 100.0 33 PDB header:transferase Chain: B: PDB Molecule:short-chain z-isoprenyl diphosphate synthetase; PDBTitle: rv1086 native 4 c1jp3A_ 100.0 95 PDB header:transferase Chain: A: PDB Molecule:undecaprenyl pyrophosphate synthase; PDBTitle: structure of e.coli undecaprenyl pyrophosphate synthase 5 d1f75a_ 100.0 38 Fold:Undecaprenyl diphosphate synthase Superfamily:Undecaprenyl diphosphate synthase Family:Undecaprenyl diphosphate synthase 6 c2d2rA_ 100.0 41 PDB header:transferase Chain: A: PDB Molecule:undecaprenyl pyrophosphate synthase; PDBTitle: crystal structure of helicobacter pylori undecaprenyl pyrophosphate2 synthase 7 c3ugsB_ 100.0 38 PDB header:transferase Chain: B: PDB Molecule:undecaprenyl pyrophosphate synthase; PDBTitle: crystal structure of a probable undecaprenyl diphosphate synthase2 (upps) from campylobacter jejuni 8 c3bdkB_ 92.3 15 PDB header:lyase Chain: B: PDB Molecule:d-mannonate dehydratase; PDBTitle: crystal structure of streptococcus suis mannonate2 dehydratase complexed with substrate analogue 9 c3cnyA_ 91.4 8 PDB header:biosynthetic protein Chain: A: PDB Molecule:inositol catabolism protein iole; PDBTitle: crystal structure of a putative inositol catabolism protein iole2 (iole, lp_3607) from lactobacillus plantarum wcfs1 at 1.85 a3 resolution 10 d1tz9a_ 85.7 18 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:UxuA-like 11 c2ou4C_ 84.2 9 PDB header:isomerase Chain: C: PDB Molecule:d-tagatose 3-epimerase; PDBTitle: crystal structure of d-tagatose 3-epimerase from2 pseudomonas cichorii 12 c2hk1D_ 84.1 12 PDB header:isomerase Chain: D: PDB Molecule:d-psicose 3-epimerase; PDBTitle: crystal structure of d-psicose 3-epimerase (dpease) in the presence of2 d-fructose 13 c2nuxB_ 81.3 9 PDB header:lyase Chain: B: PDB Molecule:2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho gluconate PDBTitle: 2-keto-3-deoxygluconate aldolase from sulfolobus acidocaldarius,2 native structure in p6522 at 2.5 a resolution 14 c3dx5A_ 79.6 13 PDB header:lyase Chain: A: PDB Molecule:uncharacterized protein asbf; PDBTitle: crystal structure of the probable 3-dhs dehydratase asbf involved in2 the petrobactin synthesis from bacillus anthracis 15 c3eb2A_ 77.4 20 PDB header:lyase Chain: A: PDB Molecule:putative dihydrodipicolinate synthetase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 rhodopseudomonas palustris at 2.0a resolution 16 c3b4uB_ 75.9 15 PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from agrobacterium2 tumefaciens str. c58 17 c3fluD_ 75.3 20 PDB header:lyase Chain: D: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from the pathogen2 neisseria meningitidis 18 c2rfgB_ 73.9 16 PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from hahella2 chejuensis at 1.5a resolution 19 c3cqkB_ 73.5 16 PDB header:isomerase Chain: B: PDB Molecule:l-ribulose-5-phosphate 3-epimerase ulae; PDBTitle: crystal structure of l-xylulose-5-phosphate 3-epimerase ulae (form b)2 complex with zn2+ and sulfate 20 c3d0cB_ 73.4 17 PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 oceanobacillus iheyensis at 1.9 a resolution 21 c3qxbB_ not modelled 72.1 9 PDB header:isomerase Chain: B: PDB Molecule:putative xylose isomerase; PDBTitle: crystal structure of a putative xylose isomerase (yp_426450.1) from2 rhodospirillum rubrum atcc 11170 at 1.90 a resolution 22 c3si9B_ not modelled 70.7 19 PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from bartonella2 henselae 23 c2zdsB_ not modelled 66.6 15 PDB header:dna binding protein Chain: B: PDB Molecule:putative dna-binding protein; PDBTitle: crystal structure of sco6571 from streptomyces coelicolor2 a3(2) 24 c3pueA_ not modelled 63.5 16 PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of the complex of dhydrodipicolinate synthase from2 acinetobacter baumannii with lysine at 2.6a resolution 25 c3s5oA_ not modelled 59.4 10 PDB header:lyase Chain: A: PDB Molecule:4-hydroxy-2-oxoglutarate aldolase, mitochondrial; PDBTitle: crystal structure of human 4-hydroxy-2-oxoglutarate aldolase bound to2 pyruvate 26 c2r8wB_ not modelled 57.4 13 PDB header:lyase Chain: B: PDB Molecule:agr_c_1641p; PDBTitle: the crystal structure of dihydrodipicolinate synthase (atu0899) from2 agrobacterium tumefaciens str. c58 27 c3cprB_ not modelled 56.4 16 PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthetase; PDBTitle: the crystal structure of corynebacterium glutamicum2 dihydrodipicolinate synthase to 2.2 a resolution 28 d1bxba_ not modelled 55.5 9 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:Xylose isomerase 29 c2v9dB_ not modelled 54.9 17 PDB header:lyase Chain: B: PDB Molecule:yage; PDBTitle: crystal structure of yage, a prophage protein belonging to2 the dihydrodipicolinic acid synthase family from e. coli3 k12 30 c3fkkA_ not modelled 52.6 21 PDB header:lyase Chain: A: PDB Molecule:l-2-keto-3-deoxyarabonate dehydratase; PDBTitle: structure of l-2-keto-3-deoxyarabonate dehydratase 31 c3kwsB_ not modelled 52.3 3 PDB header:isomerase Chain: B: PDB Molecule:putative sugar isomerase; PDBTitle: crystal structure of putative sugar isomerase (yp_001305149.1) from2 parabacteroides distasonis atcc 8503 at 1.68 a resolution 32 d1m5wa_ not modelled 51.6 15 Fold:TIM beta/alpha-barrel Superfamily:Pyridoxine 5'-phosphate synthase Family:Pyridoxine 5'-phosphate synthase 33 c3qfeB_ not modelled 51.3 13 PDB header:lyase Chain: B: PDB Molecule:putative dihydrodipicolinate synthase family protein; PDBTitle: crystal structures of a putative dihydrodipicolinate synthase family2 protein from coccidioides immitis 34 c3noeA_ not modelled 49.5 17 PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from pseudomonas2 aeruginosa 35 d1xxxa1 not modelled 49.2 16 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I aldolase 36 c3n2xB_ not modelled 48.4 18 PDB header:lyase Chain: B: PDB Molecule:uncharacterized protein yage; PDBTitle: crystal structure of yage, a prophage protein belonging to the2 dihydrodipicolinic acid synthase family from e. coli k12 in complex3 with pyruvate 37 c3ktcB_ not modelled 46.8 8 PDB header:isomerase Chain: B: PDB Molecule:xylose isomerase; PDBTitle: crystal structure of putative sugar isomerase (yp_050048.1) from2 erwinia carotovora atroseptica scri1043 at 1.54 a resolution 38 c2ehhE_ not modelled 46.6 16 PDB header:lyase Chain: E: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 aquifex aeolicus 39 c3h5dD_ not modelled 46.6 13 PDB header:lyase Chain: D: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: dihydrodipicolinate synthase from drug-resistant streptococcus2 pneumoniae 40 c2vc6A_ not modelled 45.3 18 PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: structure of mosa from s. meliloti with pyruvate bound 41 c3bi8A_ not modelled 44.1 12 PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: structure of dihydrodipicolinate synthase from clostridium2 botulinum 42 c2r94B_ not modelled 43.7 15 PDB header:lyase Chain: B: PDB Molecule:2-keto-3-deoxy-(6-phospho-)gluconate aldolase; PDBTitle: crystal structure of kd(p)ga from t.tenax 43 c2zvrA_ not modelled 42.9 9 PDB header:isomerase Chain: A: PDB Molecule:uncharacterized protein tm_0416; PDBTitle: crystal structure of a d-tagatose 3-epimerase-related2 protein from thermotoga maritima 44 c2ksnA_ not modelled 41.9 20 PDB header:signaling protein Chain: A: PDB Molecule:ubiquitin domain-containing protein 2; PDBTitle: solution structure of the n-terminal domain of dc-ubp/ubtd2 45 d1hl2a_ not modelled 41.9 16 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I aldolase 46 d1vhua_ not modelled 41.7 15 Fold:Macro domain-like Superfamily:Macro domain-like Family:Macro domain 47 d1i60a_ not modelled 41.6 13 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:IolI-like 48 d1bxca_ not modelled 39.3 7 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:Xylose isomerase 49 c3daqB_ not modelled 38.9 15 PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from methicillin-2 resistant staphylococcus aureus 50 d1otha2 not modelled 37.7 21 Fold:ATC-like Superfamily:Aspartate/ornithine carbamoyltransferase Family:Aspartate/ornithine carbamoyltransferase 51 c2ejaB_ not modelled 37.6 12 PDB header:lyase Chain: B: PDB Molecule:uroporphyrinogen decarboxylase; PDBTitle: crystal structure of uroporphyrinogen decarboxylase from2 aquifex aeolicus 52 d1o5ka_ not modelled 37.5 21 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I aldolase 53 c3g0sA_ not modelled 36.0 14 PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: dihydrodipicolinate synthase from salmonella typhimurium lt2 54 c3na8A_ not modelled 35.9 15 PDB header:lyase Chain: A: PDB Molecule:putative dihydrodipicolinate synthetase; PDBTitle: crystal structure of a putative dihydrodipicolinate synthetase from2 pseudomonas aeruginosa 55 c3dz1A_ not modelled 35.7 22 PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 rhodopseudomonas palustris at 1.87a resolution 56 c3lciA_ not modelled 34.7 16 PDB header:lyase Chain: A: PDB Molecule:n-acetylneuraminate lyase; PDBTitle: the d-sialic acid aldolase mutant v251w 57 c3bzjA_ not modelled 33.3 17 PDB header:hydrolase Chain: A: PDB Molecule:uv endonuclease; PDBTitle: uvde k229l 58 c1xhoB_ not modelled 33.2 19 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:chorismate mutase; PDBTitle: chorismate mutase from clostridium thermocellum cth-682 59 d1xhoa_ not modelled 33.2 19 Fold:Bacillus chorismate mutase-like Superfamily:YjgF-like Family:Chorismate mutase 60 c3vh1A_ not modelled 31.8 20 PDB header:metal binding protein Chain: A: PDB Molecule:ubiquitin-like modifier-activating enzyme atg7; PDBTitle: crystal structure of saccharomyces cerevisiae atg7 (1-595) 61 c3gk0H_ not modelled 31.4 15 PDB header:transferase Chain: H: PDB Molecule:pyridoxine 5'-phosphate synthase; PDBTitle: crystal structure of pyridoxal phosphate biosynthetic2 protein from burkholderia pseudomallei 62 d1fnja_ not modelled 31.2 22 Fold:Bacillus chorismate mutase-like Superfamily:YjgF-like Family:Chorismate mutase 63 c3q71A_ not modelled 30.9 13 PDB header:transferase Chain: A: PDB Molecule:poly [adp-ribose] polymerase 14; PDBTitle: human parp14 (artd8) - macro domain 2 in complex with adenosine-5-2 diphosphoribose 64 c3grfA_ not modelled 30.8 15 PDB header:transferase Chain: A: PDB Molecule:ornithine carbamoyltransferase; PDBTitle: x-ray structure of ornithine transcarbamoylase from giardia2 lamblia 65 d1vk1a_ not modelled 29.8 60 Fold:ParB/Sulfiredoxin Superfamily:ParB/Sulfiredoxin Family:Hypothetical protein PF0380 66 c1ut8B_ not modelled 28.1 8 PDB header:hydrolase Chain: B: PDB Molecule:exodeoxyribonuclease; PDBTitle: divalent metal ions (zinc) bound to t5 5'-exonuclease 67 c2yxgD_ not modelled 27.7 18 PDB header:lyase Chain: D: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihyrodipicolinate synthase (dapa) 68 d1dbfa_ not modelled 25.6 22 Fold:Bacillus chorismate mutase-like Superfamily:YjgF-like Family:Chorismate mutase 69 c2pfuA_ not modelled 25.6 10 PDB header:transport protein Chain: A: PDB Molecule:biopolymer transport exbd protein; PDBTitle: nmr strcuture determination of the periplasmic domain of exbd from2 e.coli 70 c2f9iC_ not modelled 25.5 16 PDB header:transferase Chain: C: PDB Molecule:acetyl-coenzyme a carboxylase carboxyl PDBTitle: crystal structure of the carboxyltransferase subunit of acc2 from staphylococcus aureus 71 c3gzaB_ not modelled 24.6 16 PDB header:hydrolase Chain: B: PDB Molecule:putative alpha-l-fucosidase; PDBTitle: crystal structure of putative alpha-l-fucosidase (np_812709.1) from2 bacteroides thetaiotaomicron vpi-5482 at 1.60 a resolution 72 d1cmwa2 not modelled 24.5 10 Fold:PIN domain-like Superfamily:PIN domain-like Family:5' to 3' exonuclease catalytic domain 73 d1xkya1 not modelled 23.2 18 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I aldolase 74 d2f9ya1 not modelled 22.9 16 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 75 d2a6na1 not modelled 22.7 14 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I aldolase 76 c3lmzA_ not modelled 22.5 14 PDB header:isomerase Chain: A: PDB Molecule:putative sugar isomerase; PDBTitle: crystal structure of putative sugar isomerase. (yp_001305105.1) from2 parabacteroides distasonis atcc 8503 at 1.44 a resolution 77 c3e96B_ not modelled 22.4 16 PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 bacillus clausii 78 c3ngfA_ not modelled 22.3 18 PDB header:isomerase Chain: A: PDB Molecule:ap endonuclease, family 2; PDBTitle: crystal structure of ap endonuclease, family 2 from brucella2 melitensis 79 d1nw9b_ not modelled 21.7 16 Fold:Caspase-like Superfamily:Caspase-like Family:Caspase catalytic domain 80 c3ju2A_ not modelled 21.6 24 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein smc04130; PDBTitle: crystal structure of protein smc04130 from sinorhizobium meliloti 1021 81 d1xima_ not modelled 21.5 21 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:Xylose isomerase 82 c2qtzA_ not modelled 20.6 13 PDB header:oxidoreductase Chain: A: PDB Molecule:methionine synthase reductase; PDBTitle: crystal structure of the nadp+-bound fad-containing fnr-like module of2 human methionine synthase reductase 83 c3gqeA_ not modelled 19.4 13 PDB header:viral protein Chain: A: PDB Molecule:non-structural protein 3; PDBTitle: crystal structure of macro domain of venezuelan equine encephalitis2 virus 84 c3q6zA_ not modelled 16.3 12 PDB header:transferase Chain: A: PDB Molecule:poly [adp-ribose] polymerase 14; PDBTitle: human parp14 (artd8)-macro domain 1 in complex with adenosine-5-2 diphosphoribose 85 d1f1ja_ not modelled 16.1 16 Fold:Caspase-like Superfamily:Caspase-like Family:Caspase catalytic domain 86 d1fmta2 not modelled 16.1 17 Fold:Formyltransferase Superfamily:Formyltransferase Family:Formyltransferase 87 d2eyqa6 not modelled 15.9 9 Fold:TRCF domain-like Superfamily:TRCF domain-like Family:TRCF domain 88 d1wsca1 not modelled 15.7 16 Fold:AMMECR1-like Superfamily:AMMECR1-like Family:AMMECR1-like 89 c2bpoA_ not modelled 15.6 9 PDB header:reductase Chain: A: PDB Molecule:nadph-cytochrom p450 reductase; PDBTitle: crystal structure of the yeast cpr triple mutant: d74g,2 y75f, k78a. 90 c1nmqB_ not modelled 15.6 20 PDB header:apoptosis, hydrolase Chain: B: PDB Molecule:caspase-3; PDBTitle: extendend tethering: in situ assembly of inhibitors 91 c3lerA_ not modelled 15.5 14 PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 campylobacter jejuni subsp. jejuni nctc 11168 92 d1w3ia_ not modelled 15.2 15 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I aldolase 93 c2btdA_ not modelled 15.0 23 PDB header:transferase Chain: A: PDB Molecule:pts-dependent dihydroxyacetone kinase; PDBTitle: crystal structure of dhal from e. coli 94 d1bg4a_ not modelled 14.9 11 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:beta-glycanases 95 c3eyxB_ not modelled 14.5 36 PDB header:lyase Chain: B: PDB Molecule:carbonic anhydrase; PDBTitle: crystal structure of carbonic anhydrase nce103 from2 saccharomyces cerevisiae 96 d2pp4a1 not modelled 14.4 13 Fold:TAFH domain-like Superfamily:TAFH domain-like Family:TAFH domain-like 97 d1yvka1 not modelled 14.4 17 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:N-acetyl transferase, NAT 98 c2x7vA_ not modelled 14.3 16 PDB header:hydrolase Chain: A: PDB Molecule:probable endonuclease 4; PDBTitle: crystal structure of thermotoga maritima endonuclease iv in2 the presence of zinc 99 d2q02a1 not modelled 13.7 19 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:IolI-like