Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3ktcB_

Fold library idPDB HeaderMoleculeTitle
c3ktcB_PDB header: isomeraseChain: B: PDB Molecule: xylose isomerase;PDBTitle: crystal structure of putative sugar isomerase (yp_050048.1)2 from erwinia carotovora atroseptica scri1043 at 1.54 a3 resolution


Added to library: Sun Aug 29 05:14:31 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ATYNYPEFGAGLWHFANYIDRYAVDGYGPALSTIDQINAAKEVGELSYVDLPYPFTPGVTLSEVKDALKD
Predicted secondary structure








































SS confidence





































































Known secondary structure (DSSP)






GGGGS



SS
TT
SS



SSS
STT

 .........80.........90.........100.........110.........120.........130.........140
Sequence AGLKAIGITPEIYLQKWSRGAFTNPDPAARAAAFELXHESAGIVRELGANYVKVWPGQDGWDYPFQVSHK
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP) T

TTSGGGTT
STT
SST
S

TT
SSTTSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence NLWKLAVDGXRDLAGANPDVKFAIEYKPREPRVKXTWDSAARTLLGIEDIGLDNVGVLLDFGHALYGGES
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP) T
TTS

S
SSSSSS
ST
TTTT

 .........220.........230.........240.........250.........260.........270.........280
Sequence PADSAQLIIDRGRLFGXDVNDNLRGWDDDLVVGTVHXTEIFEFFYVLKINNWQGVWQLDQFPFRENHVEA
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP) TT
B
B

SSS


B
TTSS
TT







TTS
 .........290.........300.........310.........320.........330
Sequence AQLSIRFLKHIYRALDKLDIPALQAAQEAQNPLQAQRIVQDALLSSITVS
Predicted secondary structure







SS confidence

















































Known secondary structure (DSSP) S
T
TS
SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D