PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3cqkB_

Fold library id	PDB Header	Molecule	Title
c3cqkB_	PDB header: isomerase	Chain: B: PDB Molecule: l-ribulose-5-phosphate 3-epimerase ulae;	PDBTitle: crystal structure of l-xylulose-5-phosphate 3-epimerase2 ulae (form b) complex with zn2+ and sulfate

Links to external resources
Added to library: Tue Mar 16 12:03:24 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Q I P L G I Y E K A L P A G E C W L E R L Q L A K T L G F D F V E M S V D E T D E R L S R L D W S R E Q R L A L V N A I V E T G V R V P S M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G S
S S
T T
S
S S G G G G
B

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence C L S A H R R F P L G S E D D A V R A Q G L E I M R K A I Q F A Q D V G I R V I Q L A G Y D V Y Y Q E A N N E T R R R F R D G L K E S V E M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G G T S
T T
S S T
S
S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A S R A Q V T L A M E I M D Y P L M N S I S K A L G Y A H Y L N N P W F Q L Y P D I G N L S A W D N D V Q M E L Q A G I G H I V A V H V K D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S G G G S S
T T
B S S S
T G G G B

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . .

Sequence T K P G V F K N V P F G E G V V D F E R C F E T L K Q S G Y C G P Y L I E M W S E T A E D P A A E V A K A R D W V K A R M A K A G M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S
T T S S S
T
S
T T S S S S T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	I	P	L	G	I	Y	E	K	A	L	P	A	G	E	C	W	L	E	R	L	Q	L	A	K	T	L	G	F	D	F	V	E	M	S	V	D	E	T	D	E	R	L	S	R	L	D	W	S	R	E	Q	R	L	A	L	V	N	A	I	V	E	T	G	V	R	V	P	S	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								G	G	G	S			S	S												T	T		S								S	S					G	G	G	G																			B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	C	L	S	A	H	R	R	F	P	L	G	S	E	D	D	A	V	R	A	Q	G	L	E	I	M	R	K	A	I	Q	F	A	Q	D	V	G	I	R	V	I	Q	L	A	G	Y	D	V	Y	Y	Q	E	A	N	N	E	T	R	R	R	F	R	D	G	L	K	E	S	V	E	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G	G	T	S		T	T		S	S																						T										S		S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	S	R	A	Q	V	T	L	A	M	E	I	M	D	Y	P	L	M	N	S	I	S	K	A	L	G	Y	A	H	Y	L	N	N	P	W	F	Q	L	Y	P	D	I	G	N	L	S	A	W	D	N	D	V	Q	M	E	L	Q	A	G	I	G	H	I	V	A	V	H	V	K	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T									S	S	G	G	G	S	S														T	T						B						S	S	S										T	G	G	G	B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Sequence	T	K	P	G	V	F	K	N	V	P	F	G	E	G	V	V	D	F	E	R	C	F	E	T	L	K	Q	S	G	Y	C	G	P	Y	L	I	E	M	W	S	E	T	A	E	D	P	A	A	E	V	A	K	A	R	D	W	V	K	A	R	M	A	K	A	G	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S			S				T	T	S	S	S														T			S								T	T	S	S	S	S																		T	T	T