Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3gzaB_

Fold library idPDB HeaderMoleculeTitle
c3gzaB_PDB header: hydrolaseChain: B: PDB Molecule: putative alpha-l-fucosidase;PDBTitle: crystal structure of putative alpha-l-fucosidase2 (np_812709.1) from bacteroides thetaiotaomicron vpi-5482 at3 1.60 a resolution


Added to library: Sun Aug 29 00:38:13 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ELPVPKPHQLKWHEAEXGAVFHYDLHVFDGIRYGQGNNRINPIEDYNIFNPTELNTDQWVQAAKAAGCKF
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP)





GGG



GGGGSSS


S

S
GGG


TT

TTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence AVLTATHETGFGLWQSDVNPYCLKAVKWRDGKGDIVRDFVNSCRKYGLQPGIYIGIRWNSLLGIHNFKAE
Predicted secondary structure


















































SS confidence





































































Known secondary structure (DSSP)
SS

BSS

SS
SSBGGGSSGGGGT

T


STTTTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence GEGAFARNRQAWYKRLCEKXVTELCTRYGDLYXIWFDGGADDPRADGPDVEPIVNKYQPNCLFYHNIDRA
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP) SSSSS


STT



TTTTS



TTS

SS
B
 .........220.........230.........240.........250.........260.........270.........280
Sequence DFRWGGSETGTVEYPCWSTFPVPCSHHDQLELLKHGDKNGRYWVPAXADTPLRGANGRHEWFWEPDDENN
Predicted secondary structure































































SS confidence





































































Known secondary structure (DSSP) SS
S
SSS


SS

SSSSSS




TT
S

SB

TT

BSS

TT
GGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence IYPLNTLXDKYEKSVGRNATLILGLTPDPTGLIPAGDAQRLKEXGDEINRRFSSPIARISGQKKSLTLKL
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP) S

TTTTBT



TTSS

SS
SSSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence GKEQSVNYCIIQENIKNGERIRQYQIEAKVNGKWQTVCKGESVGHKRIEKFEPVEATALRLTVSESIALP
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP)
GGG


TTS

TT
SS

 .........430.
Sequence DIINFSAYSVK
Predicted secondary structure
SS confidence










Known secondary structure (DSSP)




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D