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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3n2xB_

Fold library idPDB HeaderMoleculeTitle
c3n2xB_PDB header: lyaseChain: B: PDB Molecule: uncharacterized protein yage;PDBTitle: crystal structure of yage, a prophage protein belonging to the2 dihydrodipicolinic acid synthase family from e. coli k12 in complex3 with pyruvate


Added to library: Sat Apr 16 08:53:00 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ALFTGIIPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDR
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Known secondary structure (DSSP)

S


B



B
TTS
B
TT
S
SSTTTTGGGS
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence RVPVLIGTGGTNARETIELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADSVTLPVMLYNFPALT
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Known secondary structure (DSSP) SS


SS
T
S

SSS


T
SS


 .........150.........160.........170.........180.........190.........200.........210
Sequence GQDLTPALVKTLADSRSNIIGIDTIDSVAHLRSMIHTVKGAHPHFTVLCGYDDHLFNTLLLGGDGAISAS
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Known secondary structure (DSSP) SS



TT



S

TT
B
SSGGGTT



GG
 .........220.........230.........240.........250.........260.........270.........280
Sequence GNFAPQVSVNLLKAWRDGDVAKAAGYHQTLLQIPQMYQLDTPFVNVIKEAIVLCGRPVSTHVLPPASPLD
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Known secondary structure (DSSP) GTT
T
GGGGGGGSSS
TT




B

TTS



 .........290.......
Sequence EPRKAQLKTLLQQLKLC
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Known secondary structure (DSSP) TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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