Email l.a.kelley@imperial.ac.uk Description P0AAM7 Date Thu Jan 5 11:13:19 GMT 2012 Unique Job ID 8ba12a15c4edb1d4

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3d3rA_ 100.0 32 PDB header:chaperone Chain: A: PDB Molecule:hydrogenase assembly chaperone hypc/hupf; PDBTitle: crystal structure of the hydrogenase assembly chaperone hypc/hupf2 family protein from shewanella oneidensis mr-1 2 d2ot2a1 99.9 57 Fold:OB-fold Superfamily:HupF/HypC-like Family:HupF/HypC-like 3 d3d3ra1 99.9 32 Fold:OB-fold Superfamily:HupF/HypC-like Family:HupF/HypC-like 4 d2z1ca1 99.9 38 Fold:OB-fold Superfamily:HupF/HypC-like Family:HupF/HypC-like 5 d1rl2a2 80.6 28 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 6 c2rcnA_ 67.5 26 PDB header:hydrolase Chain: A: PDB Molecule:probable gtpase engc; PDBTitle: crystal structure of the ribosomal interacting gtpase yjeq from the2 enterobacterial species salmonella typhimurium. 7 d1vqoa2 66.7 24 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 8 c4a2iV_ 65.4 26 PDB header:ribosome/hydrolase Chain: V: PDB Molecule:putative ribosome biogenesis gtpase rsga; PDBTitle: cryo-electron microscopy structure of the 30s subunit in complex with2 the yjeq biogenesis factor 9 d2zjra2 56.1 34 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 10 c1u0lB_ 55.1 18 PDB header:hydrolase Chain: B: PDB Molecule:probable gtpase engc; PDBTitle: crystal structure of yjeq from thermotoga maritima 11 c2dgyA_ 54.3 16 PDB header:translation Chain: A: PDB Molecule:mgc11102 protein; PDBTitle: solution structure of the eukaryotic initiation factor 1a2 in mgc11102 protein 12 c2yv5A_ 54.1 17 PDB header:hydrolase Chain: A: PDB Molecule:yjeq protein; PDBTitle: crystal structure of yjeq from aquifex aeolicus 13 c3mxnB_ 53.7 18 PDB header:replication Chain: B: PDB Molecule:recq-mediated genome instability protein 2; PDBTitle: crystal structure of the rmi core complex 14 c1g0dA_ 43.4 33 PDB header:transferase Chain: A: PDB Molecule:protein-glutamine gamma-glutamyltransferase; PDBTitle: crystal structure of red sea bream transglutaminase 15 c1kv3F_ 42.5 44 PDB header:transferase Chain: F: PDB Molecule:protein-glutamine gamma-glutamyltransferase; PDBTitle: human tissue transglutaminase in gdp bound form 16 c1l9mB_ 42.3 33 PDB header:transferase Chain: B: PDB Molecule:protein-glutamine glutamyltransferase e3; PDBTitle: three-dimensional structure of the human transglutaminase 32 enzyme: binding of calcium ions change structure for3 activation 17 c1f13A_ 40.0 33 PDB header:coagulation factor Chain: A: PDB Molecule:cellular coagulation factor xiii zymogen; PDBTitle: recombinant human cellular coagulation factor xiii 18 c2oqkA_ 39.7 34 PDB header:translation Chain: A: PDB Molecule:putative translation initiation factor eif-1a; PDBTitle: crystal structure of putative cryptosporidium parvum translation2 initiation factor eif-1a 19 d2j01d2 37.2 27 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 20 d1ny4a_ 35.6 17 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 21 d2qamc2 not modelled 35.4 22 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 22 d1jt8a_ not modelled 34.9 16 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 23 d1g0da4 not modelled 33.7 30 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Transglutaminase core 24 d1d7qa_ not modelled 33.3 19 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 25 d1njjb1 not modelled 33.1 33 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Alanine racemase C-terminal domain-like Family:Eukaryotic ODC-like 26 d2q3za4 not modelled 32.8 44 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Transglutaminase core 27 d1ex0a4 not modelled 31.3 30 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Transglutaminase core 28 c1t9hA_ not modelled 31.2 9 PDB header:hydrolase Chain: A: PDB Molecule:probable gtpase engc; PDBTitle: the crystal structure of yloq, a circularly permuted gtpase. 29 d1vjja4 not modelled 29.6 30 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Transglutaminase core 30 c2xzm1_ not modelled 29.1 19 PDB header:ribosome Chain: 1: PDB Molecule:ribosomal protein s28e containing protein; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1 31 d2toda1 not modelled 28.4 33 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Alanine racemase C-terminal domain-like Family:Eukaryotic ODC-like 32 c1rl2A_ not modelled 28.3 17 PDB header:ribosomal protein Chain: A: PDB Molecule:protein (ribosomal protein l2); PDBTitle: ribosomal protein l2 rna-binding domain from bacillus2 stearothermophilus 33 d1d7ka1 not modelled 27.1 33 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Alanine racemase C-terminal domain-like Family:Eukaryotic ODC-like 34 d1ne3a_ not modelled 26.7 18 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 35 c1njjC_ not modelled 23.3 33 PDB header:lyase Chain: C: PDB Molecule:ornithine decarboxylase; PDBTitle: crystal structure determination of t. brucei ornithine2 decarboxylase bound to d-ornithine and to g418 36 c3i4oA_ not modelled 22.8 21 PDB header:translation Chain: A: PDB Molecule:translation initiation factor if-1; PDBTitle: crystal structure of translation initiation factor 1 from2 mycobacterium tuberculosis 37 c3fp9E_ not modelled 22.8 24 PDB header:hydrolase Chain: E: PDB Molecule:proteasome-associated atpase; PDBTitle: crystal structure of intern domain of proteasome-associated2 atpase, mycobacterium tuberculosis 38 d1f3ta1 not modelled 22.3 33 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Alanine racemase C-terminal domain-like Family:Eukaryotic ODC-like 39 c2hc8A_ not modelled 22.2 24 PDB header:transport protein Chain: A: PDB Molecule:cation-transporting atpase, p-type; PDBTitle: structure of the a. fulgidus copa a-domain 40 c1oy5B_ not modelled 20.2 22 PDB header:transferase Chain: B: PDB Molecule:trna (guanine-n(1)-)-methyltransferase; PDBTitle: crystal structure of trna (m1g37) methyltransferase from aquifex2 aeolicus 41 d1u0la1 not modelled 19.7 18 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 42 d1knwa1 not modelled 19.5 25 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Alanine racemase C-terminal domain-like Family:Eukaryotic ODC-like 43 c2qghA_ not modelled 19.5 17 PDB header:lyase Chain: A: PDB Molecule:diaminopimelate decarboxylase; PDBTitle: crystal structure of diaminopimelate decarboxylase from helicobacter2 pylori complexed with l-lysine 44 d1t9ha1 not modelled 19.1 14 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 45 d7odca1 not modelled 18.6 33 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Alanine racemase C-terminal domain-like Family:Eukaryotic ODC-like 46 d1oy5a_ not modelled 18.3 22 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:tRNA(m1G37)-methyltransferase TrmD 47 c1xniI_ not modelled 17.8 19 PDB header:cell cycle Chain: I: PDB Molecule:tumor suppressor p53-binding protein 1; PDBTitle: tandem tudor domain of 53bp1 48 d1twia1 not modelled 17.8 8 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Alanine racemase C-terminal domain-like Family:Eukaryotic ODC-like 49 c2p3eA_ not modelled 16.9 17 PDB header:lyase Chain: A: PDB Molecule:diaminopimelate decarboxylase; PDBTitle: crystal structure of aq1208 from aquifex aeolicus 50 c1kqsA_ not modelled 16.5 24 PDB header:ribosome Chain: A: PDB Molecule:ribosomal protein l2; PDBTitle: the haloarcula marismortui 50s complexed with a2 pretranslocational intermediate in protein synthesis 51 c2nvaH_ not modelled 15.5 33 PDB header:lyase Chain: H: PDB Molecule:arginine decarboxylase, a207r protein; PDBTitle: the x-ray crystal structure of the paramecium bursaria2 chlorella virus arginine decarboxylase bound to agmatine 52 c1knwA_ not modelled 14.9 25 PDB header:lyase Chain: A: PDB Molecule:diaminopimelate decarboxylase; PDBTitle: crystal structure of diaminopimelate decarboxylase 53 d3pnpa_ not modelled 14.4 22 Fold:Phosphorylase/hydrolase-like Superfamily:Purine and uridine phosphorylases Family:Purine and uridine phosphorylases 54 c2yxxA_ not modelled 14.3 25 PDB header:lyase Chain: A: PDB Molecule:diaminopimelate decarboxylase; PDBTitle: crystal structure analysis of diaminopimelate decarboxylate (lysa) 55 c1yr3A_ not modelled 13.7 15 PDB header:transferase Chain: A: PDB Molecule:xanthosine phosphorylase; PDBTitle: escherichia coli purine nucleoside phosphorylase ii, the2 product of the xapa gene 56 d1p3ha_ not modelled 13.6 28 Fold:GroES-like Superfamily:GroES-like Family:GroES 57 d1p3qq_ not modelled 13.5 33 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:CUE domain 58 c1w4sA_ not modelled 13.4 38 PDB header:nuclear protein Chain: A: PDB Molecule:polybromo 1 protein; PDBTitle: crystal structure of the proximal bah domain of polybromo 59 d1aono_ not modelled 13.3 24 Fold:GroES-like Superfamily:GroES-like Family:GroES 60 d1cb0a_ not modelled 13.2 11 Fold:Phosphorylase/hydrolase-like Superfamily:Purine and uridine phosphorylases Family:Purine and uridine phosphorylases 61 d1fr3a_ not modelled 12.9 11 Fold:OB-fold Superfamily:MOP-like Family:Molybdate/tungstate binding protein MOP 62 d2id1a1 not modelled 12.8 27 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:Iojap/YbeB-like 63 d1uala_ not modelled 12.7 38 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:tRNA(m1G37)-methyltransferase TrmD 64 d2a7ya1 not modelled 12.6 22 Fold:SH3-like barrel Superfamily:Cell growth inhibitor/plasmid maintenance toxic component Family:Rv2302-like 65 c2a7yA_ not modelled 12.6 22 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein rv2302/mt2359; PDBTitle: solution structure of the conserved hypothetical protein2 rv2302 from the bacterium mycobacterium tuberculosis 66 d1vmka_ not modelled 12.5 30 Fold:Phosphorylase/hydrolase-like Superfamily:Purine and uridine phosphorylases Family:Purine and uridine phosphorylases 67 c2akwB_ not modelled 12.0 15 PDB header:ligase Chain: B: PDB Molecule:phenylalanyl-trna synthetase beta chain; PDBTitle: crystal structure of t.thermophilus phenylalanyl-trna synthetase2 complexed with p-cl-phenylalanine 68 c2pljA_ not modelled 11.7 25 PDB header:lyase Chain: A: PDB Molecule:lysine/ornithine decarboxylase; PDBTitle: crystal structure of lysine/ornithine decarboxylase complexed with2 putrescine from vibrio vulnificus 69 c2k29A_ not modelled 11.5 25 PDB header:transcription Chain: A: PDB Molecule:antitoxin relb; PDBTitle: structure of the dbd domain of e. coli antitoxin relb 70 d1ntga_ not modelled 11.4 17 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Myf domain 71 d1pqwa_ not modelled 11.3 31 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 72 c3n29A_ not modelled 11.2 8 PDB header:lyase Chain: A: PDB Molecule:carboxynorspermidine decarboxylase; PDBTitle: crystal structure of carboxynorspermidine decarboxylase complexed with2 norspermidine from campylobacter jejuni 73 c3knuD_ not modelled 11.2 33 PDB header:transferase Chain: D: PDB Molecule:trna (guanine-n(1)-)-methyltransferase; PDBTitle: crystal structure of trna (guanine-n1)-methyltransferase from2 anaplasma phagocytophilum 74 d1g2oa_ not modelled 11.1 22 Fold:Phosphorylase/hydrolase-like Superfamily:Purine and uridine phosphorylases Family:Purine and uridine phosphorylases 75 c3upsA_ not modelled 11.0 19 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:iojap-like protein; PDBTitle: crystal structure of iojap-like protein from zymomonas mobilis 76 c3quvB_ not modelled 10.9 33 PDB header:transferase Chain: B: PDB Molecule:trna (guanine-n(1)-)-methyltransferase; PDBTitle: crystal structure of a trna-guanine-n1-methyltransferase from2 mycobacterium abscessus 77 c3khsB_ not modelled 10.8 26 PDB header:hydrolase Chain: B: PDB Molecule:purine nucleoside phosphorylase; PDBTitle: crystal structure of grouper iridovirus purine nucleoside2 phosphorylase 78 d1v3va2 not modelled 10.8 31 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 79 c2j66A_ not modelled 10.7 45 PDB header:lyase Chain: A: PDB Molecule:btrk; PDBTitle: structural characterisation of btrk decarboxylase from2 butirosin biosynthesis 80 c3ky7A_ not modelled 10.7 21 PDB header:transferase Chain: A: PDB Molecule:trna (guanine-n(1)-)-methyltransferase; PDBTitle: 2.35 angstrom resolution crystal structure of a putative trna2 (guanine-7-)-methyltransferase (trmd) from staphylococcus aureus3 subsp. aureus mrsa252 81 c3e6eC_ not modelled 10.6 15 PDB header:isomerase Chain: C: PDB Molecule:alanine racemase; PDBTitle: crystal structure of alanine racemase from e.faecalis2 complex with cycloserine 82 d2fzwa2 not modelled 10.6 15 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 83 d1p9pa_ not modelled 10.5 33 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:tRNA(m1G37)-methyltransferase TrmD 84 c1ltlE_ not modelled 10.4 22 PDB header:replication Chain: E: PDB Molecule:dna replication initiator (cdc21/cdc54); PDBTitle: the dodecamer structure of mcm from archaeal m.2 thermoautotrophicum 85 c2equA_ not modelled 10.4 17 PDB header:protein binding Chain: A: PDB Molecule:phd finger protein 20-like 1; PDBTitle: solution structure of the tudor domain of phd finger2 protein 20-like 1 86 c1tufA_ not modelled 10.4 8 PDB header:lyase Chain: A: PDB Molecule:diaminopimelate decarboxylase; PDBTitle: crystal structure of diaminopimelate decarboxylase from m.2 jannaschi 87 c3iefA_ not modelled 10.3 22 PDB header:transferase, rna binding protein Chain: A: PDB Molecule:trna (guanine-n(1)-)-methyltransferase; PDBTitle: crystal structure of trna guanine-n1-methyltransferase from2 bartonella henselae using mpcs. 88 c3ggsA_ not modelled 10.2 22 PDB header:transferase Chain: A: PDB Molecule:purine nucleoside phosphorylase; PDBTitle: human purine nucleoside phosphorylase double mutant e201q,n243d2 complexed with 2-fluoro-2'-deoxyadenosine 89 c3mt1B_ not modelled 10.2 8 PDB header:lyase Chain: B: PDB Molecule:putative carboxynorspermidine decarboxylase protein; PDBTitle: crystal structure of putative carboxynorspermidine decarboxylase2 protein from sinorhizobium meliloti 90 c2p4sA_ not modelled 10.1 19 PDB header:transferase Chain: A: PDB Molecule:purine nucleoside phosphorylase; PDBTitle: structure of purine nucleoside phosphorylase from anopheles gambiae in2 complex with dadme-immh 91 d2fsqa1 not modelled 10.0 6 Fold:LigT-like Superfamily:LigT-like Family:Atu0111-like 92 d2hd3a1 not modelled 10.0 33 Fold:OB-fold Superfamily:EutN/CcmL-like Family:EutN/CcmL-like 93 d2qw7a1 not modelled 9.9 24 Fold:OB-fold Superfamily:EutN/CcmL-like Family:EutN/CcmL-like 94 c3oo2A_ not modelled 9.8 16 PDB header:isomerase Chain: A: PDB Molecule:alanine racemase 1; PDBTitle: 2.37 angstrom resolution crystal structure of an alanine racemase2 (alr) from staphylococcus aureus subsp. aureus col 95 d2soba_ not modelled 9.7 9 Fold:OB-fold Superfamily:Staphylococcal nuclease Family:Staphylococcal nuclease 96 d1ltla_ not modelled 9.6 21 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:DNA replication initiator (cdc21/cdc54) N-terminal domain 97 d2nn6h1 not modelled 9.5 16 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 98 c2opkC_ not modelled 9.4 27 PDB header:isomerase Chain: C: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a putative mannose-6-phosphate isomerase2 (reut_a1446) from ralstonia eutropha jmp134 at 2.10 a resolution 99 c2zkra_ not modelled 9.4 25 PDB header:ribosomal protein/rna Chain: A: PDB Molecule:rna expansion segment es3; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map