PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2nvaH_

Fold library id	PDB Header	Molecule	Title
c2nvaH_	PDB header: lyase	Chain: H: PDB Molecule: arginine decarboxylase, a207r protein;	PDBTitle: the x-ray crystal structure of the paramecium bursaria2 chlorella virus arginine decarboxylase bound to agmatine

Links to external resources
Added to library: Tue Mar 16 14:21:12 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M N S V V N N I L Q T K S F Y V S S P K I V E D L I D Q W T I L F P R V T P H Y A V K C N N D E V L L K T M C D K N V N F D C A S S S E I K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T G G G
T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K V I Q I G V S P S R I I F A H T M K T I D D L I F A K D Q G V D I A T F D S S F E L D K I H T Y H P N C K M I L R I R C D D P N A T V Q L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
G G G
S S
T
S
T T
B
T T
S B

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G N K F G A N E D E I R H L L E Y A K Q L D I E V I G I S F H V G S G S R N P E A Y Y R A I K S S K E A F N E A I S V G H K P Y I L D I G G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T S S B
G G G T T
B S B
T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence G L H A D I G E L S T M S D Y I N D A I K D F F P E D T V T I V A E P G R F F A E H Y S V L A T Q V I G K R V R D G L Y E Y F F N E S T Y G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
T T
S G G G T T S
T T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence G F S N V I F E K S V P T P Q L L R D V P D D E E Y V P S V L Y G C T C D G V D V I N H N V A L P E L H I G D W V Y F P S W G A Y T N V L T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T S
S S
T T
S S S
T T
T T
S S
S S S G G G

. . . . . . . . . 360 . . . .

Sequence T S F N G F G E Y D V Y Y I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G

Download: PDB structure FASTA sequence
Hidden Markov model

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	N	S	V	V	N	N	I	L	Q	T	K	S	F	Y	V	S	S	P	K	I	V	E	D	L	I	D	Q	W	T	I	L	F	P	R	V	T	P	H	Y	A	V	K	C	N	N	D	E	V	L	L	K	T	M	C	D	K	N	V	N	F	D	C	A	S	S	S	E	I	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S																						T	T							G	G	G													T	T							S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	V	I	Q	I	G	V	S	P	S	R	I	I	F	A	H	T	M	K	T	I	D	D	L	I	F	A	K	D	Q	G	V	D	I	A	T	F	D	S	S	F	E	L	D	K	I	H	T	Y	H	P	N	C	K	M	I	L	R	I	R	C	D	D	P	N	A	T	V	Q	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T			G	G	G						S	S													T								S												T	T							B					T	T		S	B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	N	K	F	G	A	N	E	D	E	I	R	H	L	L	E	Y	A	K	Q	L	D	I	E	V	I	G	I	S	F	H	V	G	S	G	S	R	N	P	E	A	Y	Y	R	A	I	K	S	S	K	E	A	F	N	E	A	I	S	V	G	H	K	P	Y	I	L	D	I	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	S	S	B		G	G	G											T	T												B	S	B																								T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	L	H	A	D	I	G	E	L	S	T	M	S	D	Y	I	N	D	A	I	K	D	F	F	P	E	D	T	V	T	I	V	A	E	P	G	R	F	F	A	E	H	Y	S	V	L	A	T	Q	V	I	G	K	R	V	R	D	G	L	Y	E	Y	F	F	N	E	S	T	Y	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B																									T	T								S					G	G	G														T	T							S			T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	G	F	S	N	V	I	F	E	K	S	V	P	T	P	Q	L	L	R	D	V	P	D	D	E	E	Y	V	P	S	V	L	Y	G	C	T	C	D	G	V	D	V	I	N	H	N	V	A	L	P	E	L	H	I	G	D	W	V	Y	F	P	S	W	G	A	Y	T	N	V	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T		T					S									S	S				T	T											S	S	S		T	T														T	T						S	S			S	S	S	G	G	G
	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Sequence	T	S	F	N	G	F	G	E	Y	D	V	Y	Y	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G