PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3ky7A_

Fold library id	PDB Header	Molecule	Title
c3ky7A_	PDB header: transferase	Chain: A: PDB Molecule: trna (guanine-n(1)-)-methyltransferase;	PDBTitle: 2.35 angstrom resolution crystal structure of a putative2 trna (guanine-7-)-methyltransferase (trmd) from3 staphylococcus aureus subsp. aureus mrsa252

Links to external resources
Added to library: Sat Aug 28 15:58:17 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M K I D Y L T L F P E M F D G V L N H S I M K R A Q E N N K L Q I N T V N F R D Y A N K H N Q V D D Y P Y G G G Q G M V L K P E P V F N A M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
G G G G T T T T T S
G G G G
S
S
T T
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E D L D V T E Q A R V I L M P Q G E P F S H Q K A V E L S K A D H I V F I C G H Y E G Y D E R I R T H L V T D E I S M G D Y V L T G G E L P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T S
S
T T
S
S
B
T
S S S S
S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A M T M T D A I V R L I P G S D G L L E F P Q Y T R P R E F K G L T V P D V L L S G N H A N I D A W R H E Q K L I R T Y N K R P D L I E K Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S S
S
S T T
G G G G S
T S

. . . . . . . . . 220 . . . . . . . .

Sequence P L T N A D K Q I L E R Y K I G L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	K	I	D	Y	L	T	L	F	P	E	M	F	D	G	V	L	N	H	S	I	M	K	R	A	Q	E	N	N	K	L	Q	I	N	T	V	N	F	R	D	Y	A	N	K	H	N	Q	V	D	D	Y	P	Y	G	G	G	Q	G	M	V	L	K	P	E	P	V	F	N	A	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S		G	G	G	G							T	T	T						T	T	S								G	G	G	G				S			S					T	T			S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	D	L	D	V	T	E	Q	A	R	V	I	L	M	P	Q	G	E	P	F	S	H	Q	K	A	V	E	L	S	K	A	D	H	I	V	F	I	C	G	H	Y	E	G	Y	D	E	R	I	R	T	H	L	V	T	D	E	I	S	M	G	D	Y	V	L	T	G	G	E	L	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T			T	T	S								S												T	T		S										S		B								T							S	S	S	S			S		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	M	T	M	T	D	A	I	V	R	L	I	P	G	S	D	G	L	L	E	F	P	Q	Y	T	R	P	R	E	F	K	G	L	T	V	P	D	V	L	L	S	G	N	H	A	N	I	D	A	W	R	H	E	Q	K	L	I	R	T	Y	N	K	R	P	D	L	I	E	K	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	S					S	S								S		S			T	T					G	G	G	G	S																												T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Sequence	P	L	T	N	A	D	K	Q	I	L	E	R	Y	K	I	G	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)