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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2yxxA_

Fold library idPDB HeaderMoleculeTitle
c2yxxA_PDB header: lyaseChain: A: PDB Molecule: diaminopimelate decarboxylase;PDBTitle: crystal structure analysis of diaminopimelate decarboxylate2 (lysa)


Added to library: Tue Mar 16 12:02:28 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DILRKVAEIHGTPTYVYFEETLRKRSRLVKEVFEGVNLLPTFAVKANNNPVLLKILREEGFGXDVVTKGE
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Known secondary structure (DSSP)

SSTTTS
GGG


TT

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence LLAAKLAGVPSHTVVWNGNGKSRDQXEHFLREDVRIVNVDSFEEXEIWRELNPEGVEYFIRVNPEVDAKT
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Known secondary structure (DSSP) TT

GGG

S


TT





TT




TTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence HPHISTGLKKHKFGIPLEDLDSFXERFRSXNIRGLHVHIGSQITRVEPFVEAFSKVVRASERYGFEEINI
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Known secondary structure (DSSP) SSSSSGGGTTS




SSB

ST
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence GGGWGINYSGEELDLSSYREKVVPDLKRFKRVIVEIGRYIVAPSGYLLLRVVLVKRRHNKAFVVVDGGXN
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Known secondary structure (DSSP)


B


SSS



TGGGGTT
S
GGGTTS

TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence VLIRPALYSAYHRIFVLGKQGKEXRADVVGPLCESGDVIAYDRELPEVEPGDIIAVENAGAYGYTXSNNY
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Known secondary structure (DSSP) T

T




TT



S
SSSSTT
S


TT
SS
SSSSGGG


T
 .........360.........370.........380.....
Sequence NSTTRPAEVLVRENGRISLIRRRETEXDIFKDVVX
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Known secondary structure (DSSP) TT




TTS




TTT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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