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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c1njjC_

Fold library idPDB HeaderMoleculeTitle
c1njjC_PDB header: lyaseChain: C: PDB Molecule: ornithine decarboxylase;PDBTitle: crystal structure determination of t. brucei ornithine2 decarboxylase bound to d-ornithine and to g418


Added to library: Tue Mar 16 12:41:19 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RFLEGFNTRDALCKKGDPFFVADLGDIVRKHETWKKCLPRVTPFYAVKCNDDWRVLGTLAALGTGFDCAS
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Known secondary structure (DSSP)
B


SSS





TTGGG


TT

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence NTEIQRVRGIGVPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHPKAKMVLRISTVKFG
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Known secondary structure (DSSP) TT

GGG

SS

T


S
TT
B



S
 .........150.........160.........170.........180.........190.........200.........210
Sequence AKVEDCRFILEQAKKLNIDVTGVSFHVGSGSTDASTFAQAISDSRFVFDMGTELGFNMHILDIGGGFPGT
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Known secondary structure (DSSP) B
GGGTT





S

S
TTT









SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence RDAPLKFEEIAGVINNALEKHFPPDLKLTIVAEPGRYYVASAFTLAVNVIAKKVTQSFMYYVNDGVYGSF
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Known secondary structure (DSSP) TTSSS
S


TT


SGGG

B


B
S

TTTGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence NCILYDHAVVRPLPQREPIEKLYPSSVWGPTCDGLDQIVERYYLPEMQVGEWLLFEDMGAYTVVSPTIYY
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Known secondary structure (DSSP) GS




SS





SSS
TT



TT
S

SS




 ..
Sequence VV
Predicted secondary structure

SS confidence

Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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