Fold library entry viewer: c2akwB_

Added to library: Tue Mar 16 14:08:17 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	R	V	P	F	S	W	L	K	A	Y	V	P	E	L	E	S	P	E	V	L	E	E	R	L	A	G	L	G	F	E	T	D	R	I	E	R	V	F	P	I	P	R	G	V	V	F	A	R	V	L	E	A	H	P	I	P	G	T	R	L	K	R	L	V	L	D	A	G	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	T	S	T	T															T														T	T													T	T	S	S								S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	V	E	V	V	S	G	A	E	N	A	R	K	G	I	G	V	A	L	A	L	P	G	T	E	L	P	G	L	G	Q	K	V	G	E	R	V	I	Q	G	V	R	S	F	G	M	A	L	S	P	R	E	L	G	V	G	E	Y	G	G	G	L	L	E	F	P	E	D	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T			T	T								T	T		B		T	T	T	S	S	B							T	T					S									T	S	S	S			S	S						T	T	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	P	G	T	P	L	S	E	A	W	P	E	E	V	V	L	D	L	E	V	T	P	N	R	P	D	A	L	G	L	L	G	L	A	R	D	L	H	A	L	G	Y	A	L	V	E	P	E	A	A	L	K	A	E	A	L	P	L	P	F	A	L	K	V	E	D	P	E	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T		B	G	G	G	G	S												T	T		G	G	G	G	S											T	T																		S	S					S		T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	P	H	F	T	L	G	Y	A	F	G	L	R	V	A	P	S	P	L	W	M	Q	R	A	L	F	A	A	G	M	R	P	I	N	N	V	V	D	V	T	N	Y	V	M	L	E	R	A	Q	P	M	H	A	F	D	L	R	F	V	G	E	G	I	A	V	R	R	A	R	E	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S									S																	T	T																			T												B	T									T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	R	L	K	T	L	D	G	V	E	R	T	L	H	P	E	D	L	V	I	A	G	W	R	G	E	E	S	F	P	L	G	L	A	G	V	M	G	G	A	E	S	E	V	R	E	D	T	E	A	I	A	L	E	V	A	C	F	D	P	V	S	I	R	K	T	A	R	R	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					B	T	T	S							T	T	S								T	T								T	T	T			B	S	S	S				T	T																							T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	G	L	R	T	E	A	S	H	R	F	E	R	G	V	D	P	L	G	Q	V	P	A	Q	R	R	A	L	S	L	L	Q	A	L	A	G	A	R	V	A	E	A	L	L	E	A	G	S	P	K	P	P	E	A	I	P	F	R	P	E	Y	A	N	R	L	L	G	T	S	Y	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T															T	T																							S																										T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	E	A	E	Q	I	A	I	L	K	R	L	G	C	R	V	E	G	E	G	P	T	Y	R	V	T	P	P	S	H	R	L	D	L	R	L	E	E	D	L	V	E	E	V	A	R	I	Q	G	Y	E	T	I	P	L	A	L	P	A	F	F	P	A	P	D	N	R	G	V	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T					S		S	S	S							T	T		T	T			S														G	G	G	S											G	G	G	T	T	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	P	Y	R	K	E	Q	R	L	R	E	V	L	S	G	L	G	F	Q	E	V	Y	T	Y	S	F	M	D	P	E	D	A	R	R	F	R	L	D	P	P	R	L	L	L	L	N	P	L	A	P	E	K	A	A	L	R	T	H	L	F	P	G	L	V	R	V	L	K	E	N	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T								S				T	T					T	T					S		B		S	S		S	S	G	G	G	S				S		S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	D	L	D	R	P	E	R	A	L	L	F	E	V	G	R	V	F	R	E	R	E	E	T	H	L	A	G	L	L	F	G	E	G	V	G	L	P	W	A	K	E	R	L	S	G	Y	F	L	L	K	G	Y	L	E	A	L	F	A	R	L	G	L	A	F	R	V	E	A	Q	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S			S	B											S	S	S											B	S					T	T	S						S															T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	F	P	F	L	H	P	G	V	S	G	R	V	L	V	E	G	E	E	V	G	F	L	G	A	L	H	P	E	I	A	Q	E	L	E	L	P	P	V	H	L	F	E	L	R	L	P	L	P	D	K	P	L	A	F	Q	D	P	S	R	H	P	A	A	F	R	D	L	A	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T												T	T																	T	T											S	S													S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	V	P	A	P	T	P	Y	G	E	V	E	A	L	V	R	E	A	A	G	P	Y	L	E	S	L	A	L	F	D	L	Y	Q	G	P	P	L	P	E	G	H	K	S	L	A	F	H	L	R	F	R	H	P	K	R	T	L	R	D	E	E	V	E	E	A	V	S	R	V	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S													S		T	T												S	S	S	S		S	S													S	S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.
Sequence	A	L	R	A	R	G	F	G	L	R	G	L	D	T	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T				S

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PDB structure

FASTA sequence

Hidden Markov model

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