Email l.a.kelley@imperial.ac.uk Description P39180 Date Thu Jan 5 11:58:24 GMT 2012 Unique Job ID 84345fea00e2cb4c

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3sljA_ 100.0 19 PDB header:protein transport Chain: A: PDB Molecule:serine protease espp; PDBTitle: pre-cleavage structure of the autotransporter espp - n1023a mutant 2 c3aehB_ 100.0 18 PDB header:hydrolase Chain: B: PDB Molecule:hemoglobin-binding protease hbp autotransporter; PDBTitle: integral membrane domain of autotransporter hbp 3 d1uynx_ 100.0 13 Fold:Transmembrane beta-barrels Superfamily:Autotransporter Family:Autotransporter 4 c3qq2C_ 100.0 19 PDB header:membrane protein/protein transport Chain: C: PDB Molecule:brka autotransporter; PDBTitle: crystal structure of the beta domain of the bordetella autotransporter2 brka 5 c2qomB_ 100.0 18 PDB header:hydrolase Chain: B: PDB Molecule:serine protease espp; PDBTitle: the crystal structure of the e.coli espp autotransporter beta-domain. 6 c3kvnA_ 100.0 13 PDB header:hydrolase Chain: A: PDB Molecule:esterase esta; PDBTitle: crystal structure of the full-length autotransporter esta from2 pseudomonas aeruginosa 7 d1daba_ 99.5 13 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:Virulence factor P.69 pertactin 8 c3ml3A_ 99.1 26 PDB header:protein transport Chain: A: PDB Molecule:outer membrane protein icsa autotransporter; PDBTitle: crystal structure of the icsa autochaperone region 9 d1g90a_ 99.0 13 Fold:Transmembrane beta-barrels Superfamily:OMPA-like Family:Outer membrane protein 10 c2k0lA_ 98.9 15 PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein a; PDBTitle: nmr structure of the transmembrane domain of the outer2 membrane protein a from klebsiella pneumoniae in dhpc3 micelles. 11 c3h09B_ 98.8 13 PDB header:hydrolase Chain: B: PDB Molecule:immunoglobulin a1 protease; PDBTitle: the structure of haemophilus influenzae iga1 protease 12 c3nb3C_ 98.8 15 PDB header:virus Chain: C: PDB Molecule:outer membrane protein a; PDBTitle: the host outer membrane proteins ompa and ompc are packed at specific2 sites in the shigella phage sf6 virion as structural components 13 d1p4ta_ 98.8 19 Fold:Transmembrane beta-barrels Superfamily:OMPA-like Family:Outer membrane protein 14 d1qjpa_ 98.6 17 Fold:Transmembrane beta-barrels Superfamily:OMPA-like Family:Outer membrane protein 15 c2jmmA_ 98.5 15 PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein a; PDBTitle: nmr solution structure of a minimal transmembrane beta-2 barrel platform protein 16 c2f1tB_ 98.4 12 PDB header:membrane protein Chain: B: PDB Molecule:outer membrane protein w; PDBTitle: outer membrane protein ompw 17 c2x27X_ 98.3 15 PDB header:membrane protein Chain: X: PDB Molecule:outer membrane protein oprg; PDBTitle: crystal structure of the outer membrane protein oprg from2 pseudomonas aeruginosa 18 c3qraA_ 98.3 14 PDB header:cell invasion Chain: A: PDB Molecule:attachment invasion locus protein; PDBTitle: the crystal structure of ail, the attachment invasion locus protein of2 yersinia pestis 19 c2wjqA_ 97.9 12 PDB header:transport protein Chain: A: PDB Molecule:probable n-acetylneuraminic acid outer membrane channel PDBTitle: nanc porin structure in hexagonal crystal form. 20 d1qj8a_ 97.7 14 Fold:Transmembrane beta-barrels Superfamily:OMPA-like Family:Outer membrane protein 21 c3syjA_ not modelled 97.6 9 PDB header:cell adhesion Chain: A: PDB Molecule:adhesion and penetration protein autotransporter; PDBTitle: crystal structure of the haemophilus influenzae hap adhesin 22 c2iwvD_ not modelled 96.9 13 PDB header:ion channel Chain: D: PDB Molecule:outer membrane protein g; PDBTitle: structure of the monomeric outer membrane porin ompg in the2 open and closed conformation 23 c2x4mD_ not modelled 96.7 16 PDB header:hydrolase Chain: D: PDB Molecule:coagulase/fibrinolysin; PDBTitle: yersinia pestis plasminogen activator pla 24 c3a2rX_ not modelled 96.5 14 PDB header:membrane protein Chain: X: PDB Molecule:outer membrane protein ii; PDBTitle: crystal structure of outer membrane protein porb from neisseria2 meningitidis 25 c2lhfA_ not modelled 95.8 14 PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein h1; PDBTitle: solution structure of outer membrane protein h (oprh) from p.2 aeruginosa in dhpc micelles 26 d1i78a_ not modelled 95.5 14 Fold:Transmembrane beta-barrels Superfamily:OMPT-like Family:Outer membrane protease OMPT 27 d3prna_ not modelled 91.8 15 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Porin 28 d2zfga1 not modelled 90.6 5 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Porin 29 d1phoa_ not modelled 88.6 9 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Porin 30 d2pora_ not modelled 87.8 9 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Porin 31 c3brzA_ not modelled 80.7 13 PDB header:transport protein Chain: A: PDB Molecule:todx; PDBTitle: crystal structure of the pseudomonas putida toluene2 transporter todx 32 d1t16a_ not modelled 77.4 16 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Outer membrane protein transport protein 33 d2fgqx1 not modelled 76.5 11 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Porin 34 d1osma_ not modelled 73.9 10 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Porin 35 c3dwoX_ not modelled 60.7 17 PDB header:membrane protein Chain: X: PDB Molecule:probable outer membrane protein; PDBTitle: crystal structure of a pseudomonas aeruginosa fadl homologue 36 d1g5aa1 not modelled 53.9 32 Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:alpha-Amylases, C-terminal beta-sheet domain 37 c3bryB_ not modelled 49.6 16 PDB header:transport protein Chain: B: PDB Molecule:tbux; PDBTitle: crystal structure of the ralstonia pickettii toluene2 transporter tbux 38 d2vdfa1 not modelled 45.2 11 Fold:Transmembrane beta-barrels Superfamily:OMPT-like Family:Outer membrane adhesin/invasin OpcA 39 c1qd6C_ not modelled 38.3 18 PDB header:membrane protein Chain: C: PDB Molecule:protein (outer membrane phospholipase (ompla)); PDBTitle: outer membrane phospholipase a from escherichia coli 40 d3ulla_ not modelled 37.7 33 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Single strand DNA-binding domain, SSB 41 c2ihfA_ not modelled 32.7 44 PDB header:dna binding protein Chain: A: PDB Molecule:single-stranded dna-binding protein; PDBTitle: crystal structure of deletion mutant delta 228-252 r190a of the2 single-stranded dna binding protein from thermus aquaticus 42 c3rbhC_ not modelled 27.7 12 PDB header:transport protein Chain: C: PDB Molecule:alginate production protein alge; PDBTitle: structure of alginate export protein alge from pseudomonas aeruginosa 43 c2ervA_ not modelled 25.4 10 PDB header:membrane protein Chain: A: PDB Molecule:hypothetical protein paer03002360; PDBTitle: crystal structure of the outer membrane enzyme pagl 44 c3nsgA_ not modelled 22.8 12 PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein f; PDBTitle: crystal structure of ompf, an outer membrane protein from salmonella2 typhi 45 d1pm6a_ not modelled 18.1 6 Fold:Putative DNA-binding domain Superfamily:Putative DNA-binding domain Family:Excisionase-like 46 d1wv8a1 not modelled 16.9 22 Fold:TTHA1013/TTHA0281-like Superfamily:TTHA1013/TTHA0281-like Family:TTHA1013-like 47 d1gxya_ not modelled 16.8 11 Fold:ADP-ribosylation Superfamily:ADP-ribosylation Family:Ecto-ART 48 c3alzB_ not modelled 14.7 17 PDB header:viral protein/membrane protein Chain: B: PDB Molecule:cdw150; PDBTitle: crystal structure of the measles virus hemagglutinin bound to its2 cellular receptor slam (form i) 49 c2z5vA_ not modelled 14.1 7 PDB header:immune system Chain: A: PDB Molecule:myeloid differentiation primary response protein PDBTitle: solution structure of the tir domain of human myd88 50 d2hrva_ not modelled 13.8 17 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Viral cysteine protease of trypsin fold 51 c1fw3A_ not modelled 13.2 18 PDB header:hydrolase, membrane protein Chain: A: PDB Molecule:outer membrane phospholipase a; PDBTitle: outer membrane phospholipase a from escherichia coli 52 c3fmfA_ not modelled 12.8 24 PDB header:ligase Chain: A: PDB Molecule:dethiobiotin synthetase; PDBTitle: crystal structure of mycobacterium tuberculosis dethiobiotin2 synthetase complexed with 7,8 diaminopelargonic acid carbamate 53 d1nrja_ not modelled 12.2 33 Fold:Profilin-like Superfamily:SNARE-like Family:SRP alpha N-terminal domain-like 54 c2hw2A_ not modelled 12.2 38 PDB header:transferase Chain: A: PDB Molecule:rifampin adp-ribosyl transferase; PDBTitle: crystal structure of rifampin adp-ribosyl transferase in2 complex with rifampin 55 d1rh6a_ not modelled 11.2 6 Fold:Putative DNA-binding domain Superfamily:Putative DNA-binding domain Family:Excisionase-like 56 c2hdiA_ not modelled 10.7 17 PDB header:protein transport,antimicrobial protein Chain: A: PDB Molecule:colicin i receptor; PDBTitle: crystal structure of the colicin i receptor cir from e.coli in complex2 with receptor binding domain of colicin ia. 57 c2wvyA_ not modelled 10.4 25 PDB header:hydrolase Chain: A: PDB Molecule:alpha-1,2-mannosidase; PDBTitle: structure of the family gh92 inverting mannosidase bt21992 from bacteroides thetaiotaomicron vpi-5482 58 c3jtyB_ not modelled 9.9 13 PDB header:transport protein Chain: B: PDB Molecule:benf-like porin; PDBTitle: crystal structure of a benf-like porin from pseudomonas fluorescens2 pf-5 59 c2ww1B_ not modelled 9.0 22 PDB header:hydrolase Chain: B: PDB Molecule:putative alpha-1,2-mannosidase; PDBTitle: structure of the family gh92 inverting mannosidase bt39902 from bacteroides thetaiotaomicron vpi-5482 in complex with3 thiomannobioside 60 c2pe4A_ not modelled 8.8 42 PDB header:hydrolase Chain: A: PDB Molecule:hyaluronidase-1; PDBTitle: structure of human hyaluronidase 1, a hyaluronan hydrolyzing enzyme2 involved in tumor growth and angiogenesis 61 d1jmxa4 not modelled 8.3 23 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Quinohemoprotein amine dehydrogenase A chain, domains 4 and 5 62 c1fdfA_ not modelled 8.3 33 PDB header:signaling protein Chain: A: PDB Molecule:rhodopsin; PDBTitle: helix 7 bovine rhodopsin 63 d2f15a1 not modelled 8.2 11 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:AMPK-beta glycogen binding domain-like 64 c2gr7C_ not modelled 8.1 11 PDB header:membrane protein Chain: C: PDB Molecule:adhesin; PDBTitle: hia 992-1098 65 d2gr7a1 not modelled 8.1 11 Fold:Pili subunits Superfamily:Pili subunits Family:YadA C-terminal domain-like 66 c3fidA_ not modelled 8.0 9 PDB header:membrane protein Chain: A: PDB Molecule:putative outer membrane protein (lpxr); PDBTitle: lpxr from salmonella typhimurium 67 d1qqga2 not modelled 7.7 10 Fold:PH domain-like barrel Superfamily:PH domain-like Family:Phosphotyrosine-binding domain (PTB) 68 d2gr8a1 not modelled 7.7 11 Fold:Pili subunits Superfamily:Pili subunits Family:YadA C-terminal domain-like 69 c1z8rA_ not modelled 7.5 11 PDB header:hydrolase Chain: A: PDB Molecule:coxsackievirus b4 polyprotein; PDBTitle: 2a cysteine proteinase from human coxsackievirus b4 (strain2 jvb / benschoten / new york / 51) 70 d1euza2 not modelled 7.3 21 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases 71 d2gc9a1 not modelled 7.1 31 Fold:Lipocalins Superfamily:Lipocalins Family:Phenolic acid decarboxylase (PAD) 72 d1bgva2 not modelled 6.9 42 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases 73 c1ahuB_ not modelled 6.8 18 PDB header:flavoenzyme Chain: B: PDB Molecule:vanillyl-alcohol oxidase; PDBTitle: structure of the octameric flavoenzyme vanillyl-alcohol2 oxidase in complex with p-cresol 74 d2pi0a1 not modelled 6.8 36 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Interferon regulatory factor 75 d1cm7a_ not modelled 6.6 13 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:Dimeric isocitrate & isopropylmalate dehydrogenases 76 c2dllA_ not modelled 6.5 27 PDB header:cytokine Chain: A: PDB Molecule:interferon regulatory factor 4; PDBTitle: solution structure of the irf domain of human interferon2 regulator factors 4 77 d1k0ra4 not modelled 6.3 50 Fold:Transcription factor NusA, N-terminal domain Superfamily:Transcription factor NusA, N-terminal domain Family:Transcription factor NusA, N-terminal domain 78 d1zrua1 not modelled 6.3 13 Fold:Virus attachment protein globular domain Superfamily:Virus attachment protein globular domain Family:Lactophage receptor-binding protein head domain 79 d1tf3a3 not modelled 6.3 36 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 80 c2atmA_ not modelled 6.3 27 PDB header:hydrolase Chain: A: PDB Molecule:hyaluronoglucosaminidase; PDBTitle: crystal structure of the recombinant allergen ves v 2 81 c1kq8A_ not modelled 6.3 40 PDB header:transcription Chain: A: PDB Molecule:hepatocyte nuclear factor 3 forkhead homolog 1; PDBTitle: solution structure of winged helix protein hfh-1 82 d1kq8a_ not modelled 6.3 40 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Forkhead DNA-binding domain 83 d2zkmx2 not modelled 6.3 13 Fold:C2 domain-like Superfamily:C2 domain (Calcium/lipid-binding domain, CaLB) Family:PLC-like (P variant) 84 c3dvkB_ not modelled 6.3 33 PDB header:membrane protein Chain: B: PDB Molecule:voltage-dependent r-type calcium channel subunit alpha-1e; PDBTitle: crystal structure of ca2+/cam-cav2.3 iq domain complex 85 d1dcea2 not modelled 6.3 29 Fold:C2 domain-like Superfamily:Rab geranylgeranyltransferase alpha-subunit, insert domain Family:Rab geranylgeranyltransferase alpha-subunit, insert domain 86 d1bvua2 not modelled 6.3 21 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases 87 c3s2xB_ not modelled 6.2 50 PDB header:transferase Chain: B: PDB Molecule:acetyl-coa synthase subunit alpha; PDBTitle: structure of acetyl-coenzyme a synthase alpha subunit c-terminal2 domain 88 d1hwxa2 not modelled 6.2 16 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases 89 d1qvca_ not modelled 6.1 33 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Single strand DNA-binding domain, SSB 90 d1dwka1 not modelled 6.1 20 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Cyanase N-terminal domain 91 c3o7vX_ not modelled 6.1 27 PDB header:rna binding protein/rna Chain: X: PDB Molecule:piwi-like protein 1; PDBTitle: crystal structure of human hiwi1 (v361m) paz domain (residues 277-399)2 in complex with 14-mer rna (12-bp + 2-nt overhang) containing 2'-och33 at its 3'-end 92 c2ic7A_ not modelled 6.0 9 PDB header:transferase Chain: A: PDB Molecule:maltose transacetylase; PDBTitle: crystal structure of maltose transacetylase from2 geobacillus kaustophilus 93 c1z1sA_ not modelled 6.0 29 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein pa3332; PDBTitle: crystal structure of putative isomerase pa3332 from2 pseudomonas aeruginosa 94 c3nadB_ not modelled 5.9 31 PDB header:lyase Chain: B: PDB Molecule:ferulate decarboxylase; PDBTitle: crystal structure of phenolic acid decarboxylase from bacillus pumilus2 ui-670 95 d1jx4a1 not modelled 5.9 38 Fold:Lesion bypass DNA polymerase (Y-family), little finger domain Superfamily:Lesion bypass DNA polymerase (Y-family), little finger domain Family:Lesion bypass DNA polymerase (Y-family), little finger domain 96 c2lakA_ not modelled 5.8 8 PDB header:structure genomics, unknown function Chain: A: PDB Molecule:ahsa1-like protein rhe_ch02687; PDBTitle: solution nmr structure of the ahsa1-like protein rhe_ch02687 (1-152)2 from rhizobium etli, northeast structural genomics consortium target3 rer242 97 d2irfg_ not modelled 5.8 18 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Interferon regulatory factor 98 c1qqgA_ not modelled 5.8 15 PDB header:signal transduction Chain: A: PDB Molecule:insulin receptor substrate 1; PDBTitle: crystal structure of the ph-ptb targeting region of irs-1 99 c3qu3A_ not modelled 5.7 36 PDB header:dna binding protein Chain: A: PDB Molecule:interferon regulatory factor 7; PDBTitle: crystal structure of irf-7 dbd apo form