Fold library entry viewer: c3syjA_

Added to library: Sat Aug 27 10:29:28 2011
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	H	T	Y	F	G	I	D	Y	Q	Y	Y	R	D	F	A	E	N	K	G	K	F	T	V	G	A	Q	N	I	K	V	Y	N	K	Q	G	Q	L	V	G	T	S	M	T	K	A	P	M	I	D	F	S	V	V	S	R	N	G	V	A	A	L	V	E	N	Q	Y	I	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S											T		T	T			T	T									T	T	S							S	S	S	S					G	G	G	B		T	T	S	S						T	T				B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	A	H	N	V	G	Y	T	D	V	D	F	G	A	E	G	N	N	P	D	Q	H	R	F	T	Y	K	I	V	K	R	N	N	Y	K	K	D	N	L	H	P	Y	E	D	D	Y	H	N	P	R	L	H	K	F	V	T	E	A	A	P	I	D	M	T	S	N	M	N	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T			S							S		S	S			G	G	G												B				B	T	T	B		S		S			B					S	S				S	S					B					B	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	Y	S	D	R	T	K	Y	P	E	R	V	R	I	G	S	G	R	Q	F	W	R	N	D	Q	D	K	G	D	Q	V	A	G	A	Y	H	Y	L	T	A	G	N	T	H	N	Q	R	G	A	G	N	G	Y	S	Y	L	G	G	D	V	R	K	A	G	E	Y	G	P	L	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G		T	T	T	S									S							T	T									T	T	S															B	T								T	T	S		B	T	T	B	S		B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	I	A	G	S	K	G	D	S	G	S	P	M	F	I	Y	D	A	E	K	Q	K	W	L	I	N	G	I	L	R	E	N	G	F	Q	L	V	R	K	S	Y	F	D	E	I	F	E	R	D	L	H	T	S	L	Y	T	R	A	G	N	G	V	Y	T	I	S	G	N	D	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B			T	T		T	T								T	T	T	T																																				T	T	S										T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Q	G	S	I	T	Q	K	S	G	I	P	S	E	I	K	I	T	L	A	N	M	S	L	P	L	K	E	K	D	K	V	H	N	P	R	Y	D	G	P	N	I	Y	S	P	R	L	N	N	G	E	T	L	Y	F	M	D	Q	K	Q	G	S	L	I	F	A	S	D	I	N	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S	S	S	S	S									T	T	S		S	S							S	G	G	G		S										T									S	S							S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	G	A	G	G	L	Y	F	E	G	N	F	T	V	S	P	N	S	N	Q	T	W	Q	G	A	G	I	H	V	S	E	N	S	T	V	T	W	K	V	N	G	V	E	H	D	R	L	S	K	I	G	K	G	T	L	H	V	Q	A	K	G	E	N	K	G	S	I	S	V	G	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T							S							S	S	S		B			S	S						T	T								B			T	T							S	S	S							B	S	B
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	K	V	I	L	E	Q	Q	A	D	D	Q	G	N	K	Q	A	F	S	E	I	G	L	V	S	G	R	G	T	V	Q	L	N	D	D	K	Q	F	D	T	D	K	F	Y	F	G	F	R	G	G	R	L	D	L	N	G	H	S	L	T	F	K	R	I	Q	N	T	D	E	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								B			T	T				B	S		S														S	S	S	S		S		G	G	G					T	T							T	T						S	S					S	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	M	I	V	N	H	N	T	T	Q	A	A	N	V	T	I	T	G	N	E	S	I	V	L	P	N	G	N	N	I	N	K	L	D	Y	R	K	E	I	A	Y	N	G	W	F	G	E	T	D	K	N	K	H	N	G	R	L	N	L	I	Y	K	P	T	T	E	D	R	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S	S										S			S				S	S				G	G	G	G		S						S			S				T	T	S												S	S	S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	L	L	S	G	G	T	N	L	K	G	D	I	T	Q	T	K	G	K	L	F	F	S	G	R	P	T	P	H	A	Y	N	H	L	N	K	R	W	S	E	M	E	G	I	P	Q	G	E	I	V	W	D	H	D	W	I	N	R	T	F	K	A	E	N	F	Q	I	K	G	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S					S	S						S	S														B											T			S	B					T	T																S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	A	V	V	S	R	N	V	S	S	I	E	G	N	W	T	V	S	N	N	A	N	A	T	F	G	V	V	P	N	Q	Q	N	T	I	C	T	R	S	D	W	T	G	L	T	T	C	Q	K	V	D	L	T	D	T	K	V	I	N	S	I	P	K	T	Q	I	N	G	S	I	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S												T	T									T	T	S									T	T	T																			S							S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	L	T	D	N	A	T	A	N	V	K	G	L	A	K	L	N	G	N	V	T	L	T	N	H	S	Q	F	T	L	S	N	N	A	T	Q	I	G	N	I	R	L	S	D	N	S	T	A	T	V	D	N	A	N	L	N	G	N	V	H	L	T	D	S	A	Q	F	S	L	K	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T							S	S					S						T	T							T	T					S						T	T							S	S				S						T	T							S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	S	H	F	S	H	Q	I	Q	G	D	K	G	T	T	V	T	L	E	N	A	T	W	T	M	P	S	D	T	T	L	Q	N	L	T	L	N	N	S	T	I	T	L	N	S	A	Y	S	R	F	N	T	L	T	V	N	G	K	L	S	G	Q	G	T	F	Q	F	T	S	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S						T	T							S							S					S											S		G	G	G										S														T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	F	G	Y	K	S	D	K	L	K	L	S	N	D	A	E	G	D	Y	I	L	S	V	R	N	T	G	K	E	P	E	T	L	E	Q	L	T	L	V	E	S	K	D	N	Q	P	L	S	D	K	L	K	F	T	L	E	N	D	H	V	D	A	G	A	L	R	Y	K	L	V	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T									T	T													S				S	S										S	S	S	S				T	T						T	T	S					T	T
	.	.	.	.	.	.	.	.	.	920
Sequence	N	D	G	E	F	R	L	H	N	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T

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PDB structure

FASTA sequence

Hidden Markov model

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