PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2ihfA_

Fold library id	PDB Header	Molecule	Title
c2ihfA_	PDB header: dna binding protein	Chain: A: PDB Molecule: single-stranded dna-binding protein;	PDBTitle: crystal structure of deletion mutant delta 228-252 r190a of2 the single-stranded dna binding protein from thermus3 aquaticus

Links to external resources
Added to library: Tue Mar 16 13:43:59 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M A R G L N Q V F L I G T L T A R P D M R Y T P G G L A I L D L N L A G Q D A F T D E S G Q E R E V P W Y H R V R L L G R Q A E M W G D L L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S
T T
T T
T T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E K G Q L I F V E G R L E Y R Q W E K D G E K K S E V Q V R A E F I D P L E G R G R A L N Q V I L M G N L T R D P D L R Y T P Q G T A V V R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S S S S S S
S S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . .

Sequence L G L A V N E E R T H F L E V Q A W R E L A E W A S E L A K G D G L L V I G R L V N D R F Q T R V E A L R L E R P L E D F P P E E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	A	R	G	L	N	Q	V	F	L	I	G	T	L	T	A	R	P	D	M	R	Y	T	P	G	G	L	A	I	L	D	L	N	L	A	G	Q	D	A	F	T	D	E	S	G	Q	E	R	E	V	P	W	Y	H	R	V	R	L	L	G	R	Q	A	E	M	W	G	D	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S												S	S								T	T																		T	T																T							T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	K	G	Q	L	I	F	V	E	G	R	L	E	Y	R	Q	W	E	K	D	G	E	K	K	S	E	V	Q	V	R	A	E	F	I	D	P	L	E	G	R	G	R	A	L	N	Q	V	I	L	M	G	N	L	T	R	D	P	D	L	R	Y	T	P	Q	G	T	A	V	V	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T															S	S	S	S	S	S	S																														S	S								T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Sequence	L	G	L	A	V	N	E	E	R	T	H	F	L	E	V	Q	A	W	R	E	L	A	E	W	A	S	E	L	A	K	G	D	G	L	L	V	I	G	R	L	V	N	D	R	F	Q	T	R	V	E	A	L	R	L	E	R	P	L	E	D	F	P	P	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																										T	T			T	T