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| Protein Homology/analogY Recognition Engine V 2.2 | |||||||
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| Fold library id | Fold | Superfamily | Family |
|---|---|---|---|
| d1k0ra4 | Transcription factor NusA, N-terminal domain | Transcription factor NusA, N-terminal domain | Transcription factor NusA, N-terminal domain |
| Added to library: Tue Mar 16 12:56:54 2010 | |
|   | |
| Links to external resources | |
|---|---|
|   | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
| Sequence | V | S | R | R | H | M | N | I | D | M | A | A | L | H | A | I | E | V | D | R | G | I | S | V | N | E | L | L | E | T | I | K | S | A | L | L | T | A | Y | R | H | T | Q | G | H | Q | T | D | A | R | I | E | I | D | R | K | T | G | V | V | R | V | I | A | R | E | T | D | E | A |
| Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | S | S | S | G | G | G | S | S | B | T | T | B | S | S | T | T | T | T | S | S | T | T | T | T | T | S | S | G | G | G | S | S | S | S | S | S | S | S | ![]() | ![]() | S | S |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . |
| Sequence | G | N | L | I | S | E | W | D | D | T | P | E | G | F | G | R | I | A | A | T | T | A | R | Q | V | M | L | Q | R | F | R | D | A | E | ||||||||||||||||||||||||||||||||||||
| Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | S | S | ![]() | ![]() | T | T | S | T | T | T | T | T | T | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |
| Download: | PDB structure | FASTA sequence |
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