Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3o7vX_

Fold library idPDB HeaderMoleculeTitle
c3o7vX_PDB header: rna binding protein/rnaChain: X: PDB Molecule: piwi-like protein 1;PDBTitle: crystal structure of human hiwi1 (v361m) paz domain (residues 277-399)2 in complex with 14-mer rna (12-bp + 2-nt overhang) containing 2'-och33 at its 3'-end


Added to library: Sat Jan 15 11:31:44 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ETVLDFXFNFYHQTEEHKFQEQVSKELIGLVVLTKYNNKTYRVDDIDWDQNPKSTFKKADGSEVSFLEYY
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP)
BS


SSTT
TTSS


TT

TT

TTS
 .........80.........90.........100.......
Sequence RKQYNQEITDLKQPXLVSQPKGPAXLIPELCYLTGLT
Predicted secondary structure

























SS confidence




































Known secondary structure (DSSP)





SS







GGG





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D