Fold library entry viewer: c3h09B_

Added to library: Sun Aug 29 05:14:35 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	L	V	R	D	D	V	D	Y	Q	I	F	R	D	F	A	E	N	K	G	R	F	S	V	G	A	T	N	V	E	V	R	D	K	N	N	H	S	L	G	N	V	L	P	N	G	I	P	M	I	D	F	S	V	V	D	V	D	K	R	I	A	T	L	I	N	P	Q	Y	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	S											T		T	T			T	T			S						T	T	S						S	S	S	T	T						G	G	G	B		T	T	T								T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	G	V	K	H	V	S	N	G	V	S	E	L	H	F	G	N	L	N	G	N	M	N	N	G	N	A	K	S	H	R	D	V	S	S	E	E	N	R	Y	F	S	V	E	K	N	E	Y	P	T	K	L	N	G	K	A	V	T	T	E	D	Q	T	Q	K	R	R	E	D	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B		T	T			S	G	G	G					S	S	S				T	T	S	T	T		S		B	T	T	B		G	G	G	G									B							S	S			S										T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	M	P	R	L	D	K	F	V	T	E	V	A	P	I	E	A	S	T	A	S	S	D	A	G	T	Y	N	D	Q	N	K	Y	P	A	F	V	R	L	G	S	G	S	Q	F	I	Y	K	K	G	D	N	Y	S	L	I	L	N	N	H	E	V	G	G	N	N	L	K	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B					S	S				S	S					B			S			S	T	T	G	G	G		T	T	T										S	S															T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	D	A	Y	T	Y	G	I	A	G	T	P	Y	K	V	N	H	E	N	N	G	L	I	G	F	G	N	S	K	E	E	H	S	D	P	K	G	I	L	S	Q	D	P	L	T	N	Y	A	V	L	G	D	S	G	S	P	L	F	V	Y	D	R	E	K	G	K	W	L	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S						B		S	S					S	T	T							T	T				S	S		T	T	G	G	G	S	S	T	T	B		B			T	T		T	T								T	T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	G	S	Y	D	F	W	A	G	Y	N	K	K	S	W	Q	E	W	N	I	Y	K	P	E	F	A	K	T	V	L	D	K	D	T	A	G	S	L	T	G	S	N	T	Q	Y	N	W	N	P	T	G	K	T	S	V	I	S	N	G	S	E	S	L	N	V	D	L	F	D	S	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																T																		T	T							T	T										T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	Q	D	T	D	S	K	K	N	N	H	G	K	S	V	T	L	R	G	S	G	T	L	T	L	N	N	N	I	D	Q	G	A	G	G	L	F	F	E	G	D	Y	E	V	K	G	T	S	D	S	T	T	W	K	G	A	G	V	S	V	A	D	G	K	T	V	T	W	K	V	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S							T															S	S					T	T														S	S	T	T		B			S	S						T	T								B
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	N	P	K	S	D	R	L	A	K	I	G	K	G	T	L	I	V	E	G	K	G	E	N	K	G	S	L	K	V	G	D	G	T	V	I	L	K	Q	Q	A	D	A	N	N	K	V	K	A	F	S	Q	V	G	I	V	S	G	R	S	T	V	V	L	N	D	D	K	Q	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T							S	S	S							B	S	B									S								B			T	T				B	S		S						S	S							S	S	T	T	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	P	N	S	I	Y	F	G	F	R	G	G	R	L	D	A	N	G	N	N	L	T	F	E	H	I	R	N	I	D	D	G	A	R	L	V	N	H	N	T	S	K	T	S	T	V	T	I	T	G	E	S	L	I	T	D	P	N	T	I	T	P	Y	N	I	D	A	P	D	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G					T	T							T	T						S					S	S	T	T								S	S	S															G	G	G											S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	N	P	Y	A	F	R	R	I	K	D	G	G	Q	L	Y	L	N	L	E	N	Y	T	Y	Y	A	L	R	K	G	A	S	T	R	S	E	L	P	K	N	S	G	E	S	N	E	N	W	L	Y	M	G	K	T	S	D	E	A	K	R	N	V	M	N	H	I	N	N	E	R	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S						T	T		S	S				T	T	T	T							T	T			T	T	S				S	S	T	T				S	S						S	S																T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	N	G	F	N	G	Y	F	G	E	E	E	G	K	N	N	G	N	L	N	V	T	F	K	G	K	S	E	Q	N	R	F	L	L	T	G	G	T	N	L	N	G	D	L	K	V	E	K	G	T	L	F	L	S	G	R	P	T	P	H	A	R	D	I	A	G	I	S	S	T	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B		S			S			T	T	S												S	S	T	T							S					S	S							S															T	T	S				S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	K	D	Q	H	F	A	E	N	N	E	V	V	V	E	D	D	W	I	N	R	N	F	K	A	T	N	I	N	V	T	N	N	A	T	L	Y	S	G	R	N	V	A	N	I	T	S	N	I	T	A	S	D	N	A	K	V	H	I	G	Y	K	A	G	D	T	V	C	V	R	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G		G	G	G					T	T																T	T							T	T												T	T						S	B		T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	D	Y	T	G	Y	V	T	C	T	T	D	K	L	S	D	K	A	L	N	S	F	N	A	T	N	V	S	G	N	V	N	L	S	G	N	A	N	F	V	L	G	K	A	N	L	F	G	T	I	S	G	T	G	N	S	Q	V	R	L	T	E	N	S	H	W	H	L	T	G	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T								S								T	T	S							S						T	T						S	B					S						T	T							T	T						S	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	S	N	V	N	Q	L	N	L	D	K	G	H	I	H	L	N	A	Q	N	D	A	N	K	V	T	T	Y	N	T	L	T	V	N	S	L	S	G	N	G	S	F	Y	Y	L	T	D	L	S	N	K	Q	G	D	K	V	V	V	T	K	S	A	T	G	N	F	T	L	Q	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S	S	S				T	T	S																								G	G	G	T
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.
Sequence	D	K	T	G	E	P	T	K	N	E	L	T	L	F	D	A	S	N	A	T	R	N	N	L	N	V	S	L	V	G	N	T	V	D	L	G	A	W	K	Y	K	L	R	N	V	N	G	R	Y	D	L	Y	N	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S					S									T	T	S	B		T	T										S	S	G	G	G									T	T

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PDB structure

FASTA sequence

Hidden Markov model

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