Email l.a.kelley@imperial.ac.uk Description P0AEQ1 Date Thu Jan 5 11:23:55 GMT 2012 Unique Job ID 7f92fae55c6ed262

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2a2la1 100.0 31 Fold:Profilin-like Superfamily:GlcG-like Family:GlcG-like 2 c3fpvC_ 100.0 31 PDB header:heme binding protein Chain: C: PDB Molecule:extracellular haem-binding protein; PDBTitle: crystal structure of hbps 3 c1ysqA_ 92.3 12 PDB header:gene regulation Chain: A: PDB Molecule:hth-type transcriptional regulator yiaj; PDBTitle: the crystal structure of transcriptional regulator yaij 4 d2o9aa1 88.8 13 Fold:Profilin-like Superfamily:GAF domain-like Family:IclR ligand-binding domain-like 5 c1yspA_ 85.8 16 PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator kdgr; PDBTitle: crystal structure of the c-terminal domain of e. coli transcriptional2 regulator kdgr. 6 d1tf1a_ 83.9 10 Fold:Profilin-like Superfamily:GAF domain-like Family:IclR ligand-binding domain-like 7 c2w1rA_ 78.7 37 PDB header:transcription Chain: A: PDB Molecule:stage v sporulation protein t; PDBTitle: crystal structure of the c-terminal domain of b. subtilis2 spovt 8 d1mkma2 74.0 17 Fold:Profilin-like Superfamily:GAF domain-like Family:IclR ligand-binding domain-like 9 c1mkmA_ 71.1 17 PDB header:transcription Chain: A: PDB Molecule:iclr transcriptional regulator; PDBTitle: crystal structure of the thermotoga maritima iclr 10 c2g7uB_ 69.8 22 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:transcriptional regulator; PDBTitle: 2.3 a structure of putative catechol degradative operon regulator from2 rhodococcus sp. rha1 11 c3bjnA_ 68.3 17 PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, putative; PDBTitle: crystal structure of c-terminal domain of putative transcriptional2 regulator from vibrio cholerae, targeted domain 79-240 12 c3r4kD_ 62.3 22 PDB header:dna binding protein Chain: D: PDB Molecule:transcriptional regulator, iclr family; PDBTitle: crystal structure of a putative iclr transcriptional regulator2 (tm1040_3717) from silicibacter sp. tm1040 at 2.46 a resolution 13 c3obfA_ 61.4 9 PDB header:transcription regulator Chain: A: PDB Molecule:putative transcriptional regulator, iclr family; PDBTitle: crystal structure of putative transcriptional regulator, iclr family;2 targeted domain 129...302 14 c3ksiA_ 60.2 24 PDB header:oxidoreductase Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: structure of frmsr of staphylococcus aureus (complex with 2-propanol) 15 d1iruk_ 57.6 28 Fold:Ntn hydrolase-like Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases) Family:Proteasome subunits 16 d1irui_ 55.8 8 Fold:Ntn hydrolase-like Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases) Family:Proteasome subunits 17 c3mq0A_ 51.4 11 PDB header:transcription repressor Chain: A: PDB Molecule:transcriptional repressor of the blcabc operon; PDBTitle: crystal structure of agobacterium tumefaciens repressor blcr 18 c2ia2D_ 49.9 19 PDB header:transcription Chain: D: PDB Molecule:putative transcriptional regulator; PDBTitle: the crystal structure of a putative transcriptional regulator rha061952 from rhodococcus sp. rha1 19 c2o9bA_ 48.1 25 PDB header:transferase Chain: A: PDB Molecule:bacteriophytochrome; PDBTitle: crystal structure of bacteriophytochrome chromophore binding domain 20 c1q5rD_ 46.5 20 PDB header:hydrolase Chain: D: PDB Molecule:proteasome alpha-type subunit 1; PDBTitle: the rhodococcus 20s proteasome with unprocessed pro-peptides 21 d1vhma_ not modelled 46.4 36 Fold:Profilin-like Superfamily:GAF domain-like Family:GAF domain 22 c2oolA_ not modelled 46.3 25 PDB header:signaling protein Chain: A: PDB Molecule:sensor protein; PDBTitle: crystal structure of the chromophore-binding domain of an unusual2 bacteriophytochrome rpbphp3 from r. palustris 23 d1iru2_ not modelled 44.5 16 Fold:Ntn hydrolase-like Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases) Family:Proteasome subunits 24 d1p0za_ not modelled 43.4 23 Fold:Profilin-like Superfamily:Sensory domain-like Family:Sensory domain of two-component sensor kinase 25 d1irul_ not modelled 43.1 13 Fold:Ntn hydrolase-like Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases) Family:Proteasome subunits 26 d1rypi_ not modelled 43.0 19 Fold:Ntn hydrolase-like Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases) Family:Proteasome subunits 27 c3nzwH_ not modelled 42.6 19 PDB header:hydrolase/hydrolase inhibitor Chain: H: PDB Molecule:proteasome component pup1; PDBTitle: crystal structure of the yeast 20s proteasome in complex with 2b 28 d1iruh_ not modelled 39.8 11 Fold:Ntn hydrolase-like Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases) Family:Proteasome subunits 29 d1ryph_ not modelled 39.6 17 Fold:Ntn hydrolase-like Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases) Family:Proteasome subunits 30 c2o0yB_ not modelled 38.4 19 PDB header:transcription Chain: B: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of putative transcriptional regulator rha1_ro069532 (iclr-family) from rhodococcus sp. 31 d1rypl_ not modelled 38.1 18 Fold:Ntn hydrolase-like Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases) Family:Proteasome subunits 32 d1rypj_ not modelled 35.7 11 Fold:Ntn hydrolase-like Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases) Family:Proteasome subunits 33 d1q5qa_ not modelled 35.6 20 Fold:Ntn hydrolase-like Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases) Family:Proteasome subunits 34 c3bchA_ not modelled 34.7 25 PDB header:cell adhesion, ribosomal protein Chain: A: PDB Molecule:40s ribosomal protein sa; PDBTitle: crystal structure of the human laminin receptor precursor 35 c1vhmB_ not modelled 34.5 36 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:protein yebr; PDBTitle: crystal structure of an hypothetical protein 36 d1iruj_ not modelled 34.4 8 Fold:Ntn hydrolase-like Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases) Family:Proteasome subunits 37 c3dbaB_ not modelled 33.7 14 PDB header:hydrolase Chain: B: PDB Molecule:cone cgmp-specific 3',5'-cyclic phosphodiesterase subunit PDBTitle: crystal structure of the cgmp-bound gaf a domain from the2 photoreceptor phosphodiesterase 6c 38 c2w1tB_ not modelled 32.0 33 PDB header:transcription Chain: B: PDB Molecule:stage v sporulation protein t; PDBTitle: crystal structure of b. subtilis spovt 39 d1q5rh_ not modelled 31.8 8 Fold:Ntn hydrolase-like Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases) Family:Proteasome subunits 40 c3ajvA_ not modelled 31.5 21 PDB header:hydrolase Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: splicing endonuclease from aeropyrum pernix 41 d1iru1_ not modelled 29.6 16 Fold:Ntn hydrolase-like Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases) Family:Proteasome subunits 42 c2zyzA_ not modelled 29.4 10 PDB header:splicing Chain: A: PDB Molecule:putative uncharacterized protein pae0789; PDBTitle: pyrobaculum aerophilum splicing endonuclease 43 d1ryp1_ not modelled 29.0 11 Fold:Ntn hydrolase-like Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases) Family:Proteasome subunits 44 c2gx5B_ not modelled 28.2 24 PDB header:transcription Chain: B: PDB Molecule:gtp-sensing transcriptional pleiotropic repressor cody; PDBTitle: n-terminal gaf domain of transcriptional pleiotropic repressor cody 45 c3nzxK_ not modelled 28.0 14 PDB header:hydrolase/hydrolase inhibitor Chain: K: PDB Molecule:proteasome component pre2; PDBTitle: crystal structure of the yeast 20s proteasome in complex with ligand2 2c 46 c3d3oA_ not modelled 27.7 11 PDB header:transcription regulator Chain: A: PDB Molecule:putative transcriptional regulator, icir family; PDBTitle: crystal structure of the effector domain of the putative2 transcriptional regulator iclr from acinetobacter sp. adp1 47 c2k31A_ not modelled 27.3 16 PDB header:hydrolase Chain: A: PDB Molecule:phosphodiesterase 5a, cgmp-specific; PDBTitle: solution structure of cgmp-binding gaf domain of2 phosphodiesterase 5 48 d1k3sa_ not modelled 25.5 30 Fold:Secretion chaperone-like Superfamily:Type III secretory system chaperone-like Family:Type III secretory system chaperone 49 c1h4uA_ not modelled 24.9 26 PDB header:extracellular matrix protein Chain: A: PDB Molecule:nidogen-1; PDBTitle: domain g2 of mouse nidogen-1 50 d2veaa1 not modelled 24.7 19 Fold:Profilin-like Superfamily:GAF domain-like Family:GAF domain 51 d2o9ca1 not modelled 24.6 44 Fold:Profilin-like Superfamily:GAF domain-like Family:GAF domain 52 c3p01C_ not modelled 24.1 11 PDB header:signaling protein Chain: C: PDB Molecule:two-component response regulator; PDBTitle: crystal structure of two-component response regulator from nostoc sp.2 pcc 7120 53 d2uubb1 not modelled 23.5 36 Fold:Flavodoxin-like Superfamily:Ribosomal protein S2 Family:Ribosomal protein S2 54 d1rypk_ not modelled 23.4 14 Fold:Ntn hydrolase-like Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases) Family:Proteasome subunits 55 c3eeaB_ not modelled 23.3 28 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:gaf domain/hd domain protein; PDBTitle: the crystal structure of the gaf domain/hd domain protein2 from geobacter sulfurreducens 56 d1b28a_ not modelled 22.8 17 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:Arc/Mnt-like phage repressors 57 d3c2wa1 not modelled 22.3 27 Fold:Profilin-like Superfamily:GAF domain-like Family:GAF domain 58 d1r5ta_ not modelled 21.1 6 Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Cytidine deaminase 59 c3mmhA_ not modelled 20.5 17 PDB header:oxidoreductase Chain: A: PDB Molecule:methionine-r-sulfoxide reductase; PDBTitle: x-ray structure of free methionine-r-sulfoxide reductase from2 neisseria meningitidis in complex with its substrate 60 c3bbnB_ not modelled 20.3 14 PDB header:ribosome Chain: B: PDB Molecule:ribosomal protein s2; PDBTitle: homology model for the spinach chloroplast 30s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome. 61 c2fhgC_ not modelled 19.4 8 PDB header:hydrolase Chain: C: PDB Molecule:proteasome, beta subunit; PDBTitle: crystal structure of mycobacterial tuberculosis proteasome 62 c3izbA_ not modelled 18.6 29 PDB header:ribosome Chain: A: PDB Molecule:40s ribosomal protein rps0 (s2p); PDBTitle: localization of the small subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome 63 d2oola1 not modelled 17.5 19 Fold:Profilin-like Superfamily:GAF domain-like Family:GAF domain 64 d1mq0a_ not modelled 17.4 13 Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Cytidine deaminase 65 c2zkqb_ not modelled 17.1 25 PDB header:ribosomal protein/rna Chain: B: PDB Molecule:rna expansion segment es3; PDBTitle: structure of a mammalian ribosomal 40s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map 66 c3h4pj_ not modelled 16.4 17 PDB header:hydrolase Chain: J: PDB Molecule:proteasome subunit alpha; PDBTitle: proteasome 20s core particle from methanocaldococcus2 jannaschii 67 d1bdta_ not modelled 16.3 17 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:Arc/Mnt-like phage repressors 68 d1xmta_ not modelled 16.2 29 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:N-acetyl transferase, NAT 69 d1iruc_ not modelled 16.1 12 Fold:Ntn hydrolase-like Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases) Family:Proteasome subunits 70 d1ktea_ not modelled 16.0 38 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 71 d2gy9b1 not modelled 15.9 23 Fold:Flavodoxin-like Superfamily:Ribosomal protein S2 Family:Ribosomal protein S2 72 c3c1sA_ not modelled 15.6 38 PDB header:oxidoreductase Chain: A: PDB Molecule:glutaredoxin-1; PDBTitle: crystal structure of grx1 in glutathionylated form 73 d1irub_ not modelled 15.6 11 Fold:Ntn hydrolase-like Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases) Family:Proteasome subunits 74 c3d5jB_ not modelled 15.5 46 PDB header:oxidoreductase Chain: B: PDB Molecule:glutaredoxin-2, mitochondrial; PDBTitle: structure of yeast grx2-c30s mutant with glutathionyl mixed2 disulfide 75 d1wosa1 not modelled 15.2 21 Fold:Elongation factor/aminomethyltransferase common domain Superfamily:Aminomethyltransferase beta-barrel domain Family:Aminomethyltransferase beta-barrel domain 76 c2jacA_ not modelled 15.1 38 PDB header:electron transport Chain: A: PDB Molecule:glutaredoxin-1; PDBTitle: glutaredoxin grx1p c30s mutant from yeast 77 d1egoa_ not modelled 14.8 54 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 78 c3ipzA_ not modelled 14.7 25 PDB header:electron transport, oxidoreductase Chain: A: PDB Molecule:monothiol glutaredoxin-s14, chloroplastic; PDBTitle: crystal structure of arabidopsis monothiol glutaredoxin atgrxcp 79 d1q5qh_ not modelled 14.5 8 Fold:Ntn hydrolase-like Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases) Family:Proteasome subunits 80 c2h6jI_ not modelled 14.5 8 PDB header:hydrolase Chain: I: PDB Molecule:proteasome beta-type subunit 1; PDBTitle: crystal structure of the beta f145a rhodococcus proteasome (casp2 target) 81 c3ieyB_ not modelled 14.3 13 PDB header:hydrolase/rna binding protein Chain: B: PDB Molecule:neq261; PDBTitle: crystal structure of the functional nanoarchaeum equitans trna2 splicing endonuclease 82 c2hzfA_ not modelled 14.0 31 PDB header:electron transport, oxidoreductase Chain: A: PDB Molecule:glutaredoxin-1; PDBTitle: crystal structures of a poxviral glutaredoxin in the oxidized and2 reduced states show redox-correlated structural changes 83 c2ht9A_ not modelled 13.8 46 PDB header:oxidoreductase Chain: A: PDB Molecule:glutaredoxin-2; PDBTitle: the structure of dimeric human glutaredoxin 2 84 c3ef5A_ not modelled 13.7 18 PDB header:hydrolase Chain: A: PDB Molecule:probable pyrophosphohydrolase; PDBTitle: structure of the rna pyrophosphohydrolase bdrpph in complex with dgtp 85 c1s1hB_ not modelled 13.2 33 PDB header:ribosome Chain: B: PDB Molecule:40s ribosomal protein s0-a; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1h,4 contains 40s subunit. the 60s ribosomal subunit is in file5 1s1i. 86 c3r2nC_ not modelled 13.0 13 PDB header:hydrolase Chain: C: PDB Molecule:cytidine deaminase; PDBTitle: crystal structure of cytidine deaminase from mycobacterium leprae 87 d1jhba_ not modelled 12.9 38 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 88 c2e7pC_ not modelled 12.8 46 PDB header:electron transport Chain: C: PDB Molecule:glutaredoxin; PDBTitle: crystal structure of the holo form of glutaredoxin c1 from populus2 tremula x tremuloides 89 c2wulB_ not modelled 12.5 33 PDB header:oxidoreductase Chain: B: PDB Molecule:glutaredoxin related protein 5; PDBTitle: crystal structure of the human glutaredoxin 5 with bound2 glutathione in an fes cluster 90 d1pj5a1 not modelled 12.5 21 Fold:Elongation factor/aminomethyltransferase common domain Superfamily:Aminomethyltransferase beta-barrel domain Family:Aminomethyltransferase beta-barrel domain 91 c3p01A_ not modelled 12.4 11 PDB header:signaling protein Chain: A: PDB Molecule:two-component response regulator; PDBTitle: crystal structure of two-component response regulator from nostoc sp.2 pcc 7120 92 c2c5sA_ not modelled 12.4 47 PDB header:rna-binding protein Chain: A: PDB Molecule:probable thiamine biosynthesis protein thii; PDBTitle: crystal structure of bacillus anthracis thii, a trna-2 modifying enzyme containing the predicted rna-binding3 thump domain 93 c3o5yA_ not modelled 12.1 14 PDB header:transcription regulator Chain: A: PDB Molecule:sensor protein; PDBTitle: the crystal structure of the gaf domain of a two-component sensor2 histidine kinase from bacillus halodurans to 2.45a 94 d1j2qh_ not modelled 12.1 8 Fold:Ntn hydrolase-like Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases) Family:Proteasome subunits 95 c1mc0A_ not modelled 12.0 22 PDB header:hydrolase Chain: A: PDB Molecule:3',5'-cyclic nucleotide phosphodiesterase 2a; PDBTitle: regulatory segment of mouse 3',5'-cyclic nucleotide phosphodiesterase2 2a, containing the gaf a and gaf b domains 96 c2xznB_ not modelled 11.7 33 PDB header:ribosome Chain: B: PDB Molecule:rps0e; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2 97 d1yarh1 not modelled 11.5 8 Fold:Ntn hydrolase-like Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases) Family:Proteasome subunits 98 c3h8qB_ not modelled 11.0 31 PDB header:oxidoreductase Chain: B: PDB Molecule:thioredoxin reductase 3; PDBTitle: crystal structure of glutaredoxin domain of human thioredoxin2 reductase 3 99 c3l4nA_ not modelled 11.0 42 PDB header:oxidoreductase Chain: A: PDB Molecule:monothiol glutaredoxin-6; PDBTitle: crystal structure of yeast monothiol glutaredoxin grx6