Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3izbA_

Fold library idPDB HeaderMoleculeTitle
c3izbA_PDB header: ribosomeChain: A: PDB Molecule: 40s ribosomal protein rps0 (s2p);PDBTitle: localization of the small subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome


Added to library: Sat Dec 11 13:46:53 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MSLPATFDLTPEDAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIPNP
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP)











SS

TTSS

S


TTTTTS

B

SSS

B



SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence EDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSDAQAIKEASYVN
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP)



STTTT

SS

SSTTTSTTSS
SS

SS
TTTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence IPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSIMPDLYFYRDPEEV
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP)




TTS
STT
S



SSSTTTS


S








SSS






S
 .........220.........230.........240.........250..
Sequence EQQVAEEATTEEAGEEEAKEEVTEEQAEATEWAEENADNVEW
Predicted secondary structure

























SS confidence









































Known secondary structure (DSSP)
STT


S



SS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D