PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d1rypj_

Fold library id	Fold	Superfamily	Family
d1rypj_	Ntn hydrolase-like	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	Proteasome subunits

Links to external resources
Added to library: Tue Mar 16 14:27:33 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S D P S S I N G G I V V A M T G K D C V A I A C D L R L G S Q S L G V S N K F E K I F H Y G H V F L G I T G L A T D V T T L N E M F R Y K T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G S S
S S
T T S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence N L Y K L K E E R A I E P E T F T Q L V S S S L Y E R R F G P Y F V G P V V A G I N S K S G K P F I A G F D L I G C I D E A K D F I V S G T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
T T T T S
T T T
T T
S S T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . .

Sequence A S D Q L F G M C E S L Y E P N L E P E D L F E T I S Q A L L N A A D R D A L S G W G A V V Y I I K K D E V V K R Y L K M R Q D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S
T T
T T S
S
S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	D	P	S	S	I	N	G	G	I	V	V	A	M	T	G	K	D	C	V	A	I	A	C	D	L	R	L	G	S	Q	S	L	G	V	S	N	K	F	E	K	I	F	H	Y	G	H	V	F	L	G	I	T	G	L	A	T	D	V	T	T	L	N	E	M	F	R	Y	K	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G	S	S										S	S													T	T					S									T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	L	Y	K	L	K	E	E	R	A	I	E	P	E	T	F	T	Q	L	V	S	S	S	L	Y	E	R	R	F	G	P	Y	F	V	G	P	V	V	A	G	I	N	S	K	S	G	K	P	F	I	A	G	F	D	L	I	G	C	I	D	E	A	K	D	F	I	V	S	G	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S																	T	T	T	T	S													T	T	T										T	T							S	S						T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Sequence	A	S	D	Q	L	F	G	M	C	E	S	L	Y	E	P	N	L	E	P	E	D	L	F	E	T	I	S	Q	A	L	L	N	A	A	D	R	D	A	L	S	G	W	G	A	V	V	Y	I	I	K	K	D	E	V	V	K	R	Y	L	K	M	R	Q	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T														S	S																			T	T		T	T	S		S									S	S