PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3h4pj_

Fold library id	PDB Header	Molecule	Title
c3h4pj_	PDB header: hydrolase	Chain: J: PDB Molecule: proteasome subunit alpha;	PDBTitle: proteasome 20s core particle from methanocaldococcus2 jannaschii

Links to external resources
Added to library: Sun Aug 29 13:13:40 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T T T V G L I C D D A V I L A T D K R A S L G N L V A D K E A K K L Y K I D D Y I A M T I A G S V G D A Q A I V R L L I A E A K L Y K M R T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T S S
T T
S
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G R N I P P L A C A T L L S N I L H S S R M F P F L T Q I I I G G Y D L L E G A K L F S L D P L G G M N E E K T F T A T G S G S P I A Y G V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
T T T T T T
T T T
T T
S S S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . .

Sequence L E A G Y D R D M S V E E G I K L A L N A L K S A M E R D T F S G N G I S L A V I T K D G V K I F E D E E I E K I L D S M K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T T
T S
T T S
S S
T T
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	T	T	V	G	L	I	C	D	D	A	V	I	L	A	T	D	K	R	A	S	L	G	N	L	V	A	D	K	E	A	K	K	L	Y	K	I	D	D	Y	I	A	M	T	I	A	G	S	V	G	D	A	Q	A	I	V	R	L	L	I	A	E	A	K	L	Y	K	M	R	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T													T	T					S	S									T	T							S																							T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	R	N	I	P	P	L	A	C	A	T	L	L	S	N	I	L	H	S	S	R	M	F	P	F	L	T	Q	I	I	I	G	G	Y	D	L	L	E	G	A	K	L	F	S	L	D	P	L	G	G	M	N	E	E	K	T	F	T	A	T	G	S	G	S	P	I	A	Y	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S																	T	T	T	T	T	T												T	T	T									T	T							S	S					S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Sequence	L	E	A	G	Y	D	R	D	M	S	V	E	E	G	I	K	L	A	L	N	A	L	K	S	A	M	E	R	D	T	F	S	G	N	G	I	S	L	A	V	I	T	K	D	G	V	K	I	F	E	D	E	E	I	E	K	I	L	D	S	M	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S			T	T																			T	S		T	T	S		S	S								T	T							T