PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d1irui_

Fold library id	Fold	Superfamily	Family
d1irui_	Ntn hydrolase-like	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	Proteasome subunits

Links to external resources
Added to library: Tue Mar 16 12:16:11 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T T I A G V V Y K D G I V L G A D T R A T E G M V V A D K N C S K I H F I S P N I Y C C G A G T A A D T D M T T Q L I S S N L E L H S L S T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S S S S S
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G R L P R V V T A N R M L K Q M L F R Y R G Y I G A A L V L G G V D V T G P H L Y S I Y P H G S T D K L P Y V T M G S G S L A A M A V F E D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T T
S
S S
T T S
S S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence K F R P D M E E E E A K N L V S E A I A A G I F N D L G S G S N I D L C V I S K N K L D F L R P Y T V P N K K G T R L G R Y R C E K G T T A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T
T
T T
S
T T
S
S
T T
S

. . . . . . . . . 220

Sequence V L T E K I T P L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	T	I	A	G	V	V	Y	K	D	G	I	V	L	G	A	D	T	R	A	T	E	G	M	V	V	A	D	K	N	C	S	K	I	H	F	I	S	P	N	I	Y	C	C	G	A	G	T	A	A	D	T	D	M	T	T	Q	L	I	S	S	N	L	E	L	H	S	L	S	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T												S	S	S	S				S	S									T	T								S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	R	L	P	R	V	V	T	A	N	R	M	L	K	Q	M	L	F	R	Y	R	G	Y	I	G	A	A	L	V	L	G	G	V	D	V	T	G	P	H	L	Y	S	I	Y	P	H	G	S	T	D	K	L	P	Y	V	T	M	G	S	G	S	L	A	A	M	A	V	F	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S																		T	T	T		S											S	S									T	T	S						S					S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	F	R	P	D	M	E	E	E	E	A	K	N	L	V	S	E	A	I	A	A	G	I	F	N	D	L	G	S	G	S	N	I	D	L	C	V	I	S	K	N	K	L	D	F	L	R	P	Y	T	V	P	N	K	K	G	T	R	L	G	R	Y	R	C	E	K	G	T	T	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			T	T								T														T	T			S									T	T						S													S						T	T		S
	.	.	.	.	.	.	.	.	.	220
Sequence	V	L	T	E	K	I	T	P	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S